RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 PRPF4O43172 522 aaKnown RBP eCLIP4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 HNRNPRO43390 633 aaKnown RBP4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 CHST10O43529 356 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 PRAMEF2O60811 474 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 PHF2O75151 1096 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 PIAS1O75925 651 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 C8GP07360 202 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 HIST1H2AGP0C0S8 130 aaPredicted RBP4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 ENO3P13929 434 aaPredicted RBP4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 RAC2P15153 192 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 POU3F2P20265 443 aaPredicted RBP4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 HIST1H2ADP20671 130 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 SAT1P21673 171 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 IVDP26440 423 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 PER3P56645 1201 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 OR4D2P58180 307 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 MRPS25P82663 173 aaKnown RBP4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 HSF1Q00613 529 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 RHAGQ02094 409 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 OC90Q02509 493 aaPredicted RBP4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 TUBA3CQ13748 450 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 PTK6Q13882 451 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 CRYMQ14894 314 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 ABRAXAS2Q15018 415 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 PPP1R7Q15435 360 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 OR1C1Q15619 314 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 C3AR1Q16581 482 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 MAPKAPK3Q16644 382 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 CYP1B1Q16678 543 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 C18orf21Q32NC0 220 aaPredicted RBP4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 DEFB134Q4QY38 66 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 ACER2Q5QJU3 275 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 TEDDM1Q5T9Z0 273 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 RNASEH2BQ5TBB1 312 aaKnown RBP4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 HECTD2Q5U5R9 776 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 PLAG1Q6DJT9 500 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 UGT3A1Q6NUS8 523 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 H3F3CQ6NXT2 135 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 TUBA3EQ6PEY2 450 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 TRMT10BQ6PF06 316 aaKnown RBP4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 PAPD4Q6PIY7 484 aaKnown RBP4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 LCTLQ6UWM7 567 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 C3P1Q6ZMU1 363 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 C17orf64Q86WR6 236 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 SPPL2CQ8IUH8 684 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 CRLF3Q8IUI8 442 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 MCEMP1Q8IX19 187 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 PALM2Q8IXS6 379 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 Q8N1Y9 231 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 SLC35F6Q8N357 371 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 GPATCH11Q8N954 259 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 MFSD9Q8NBP5 474 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 CAMKVQ8NCB2 501 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 PLPP5Q8NEB5 264 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 OR2W6PQ8NHA6 318 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 SUN3Q8TAQ9 357 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 CALML6Q8TD86 181 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 ADAMTS18Q8TE60 1221 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 CHTF18Q8WVB6 975 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 LINGO1Q96FE5 620 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 CFAP36Q96G28 342 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 SNF8Q96H20 258 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 CCDC120Q96HB5 630 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 HIST1H2AHQ96KK5 128 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 ZNF354BQ96LW1 612 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 TSNARE1Q96NA8 513 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 OSBPL9Q96SU4 736 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 OLFM1Q99784 485 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 EBNA1BP2Q99848 306 aaKnown RBP4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 HIST1H2AJQ99878 128 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 H2AFJQ9BTM1 129 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 BRINP2Q9C0B6 783 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 DDX47Q9H0S4 455 aaKnown RBP4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 RHBGQ9H310 441 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 PLAC1Q9HBJ0 212 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 ANKHQ9HCJ1 492 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 LANCL2Q9NS86 450 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 ARL15Q9NXU5 204 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 TAS2R13Q9NYV9 303 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 KLHL42Q9P2K6 505 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 MCM8Q9UJA3 840 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 TINAGQ9UJW2 476 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 NPIPA1Q9UND3 350 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 ENTPD4Q9Y227 616 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 VWA7Q9Y334 891 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 JRKLQ9Y4A0 524 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 COMMD10Q9Y6G5 202 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 NCKAP5O14513 1909 aa4.4□□□□□ -1.71
GTF3C3-208ENST00000455546 PRRC2CQ9Y520 2896 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 PHF3Q92576 2039 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 A0A0G2JN53 185 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 GABRR3A8MPY1 467 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 C19orf84I3L1E1 186 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 ZNF561-AS1K7EIQ3 104 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 PGRMC1O00264 195 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 CDC7O00311 574 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 DNALI1O14645 258 aaPredicted RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 SLC16A5O15375 505 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 TTI1O43156 1089 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms