RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-206ENST00000453543 RGMAQ96B86 450 aa28.05■■■□□ 2.08
CCDC117-206ENST00000453543 UTP23Q9BRU9 249 aaKnown RBP28.05■■■□□ 2.08
CCDC117-206ENST00000453543 FBXW2Q9UKT8 454 aa28.05■■■□□ 2.08
CCDC117-206ENST00000453543 TRBV11-1A0A0K0K1C0 115 aa28.04■■■□□ 2.08
CCDC117-206ENST00000453543 A8MT66 165 aa28.04■■■□□ 2.08
CCDC117-206ENST00000453543 ETHE1O95571 254 aa28.04■■■□□ 2.08
CCDC117-206ENST00000453543 RPS17P08708 135 aaKnown RBP28.04■■■□□ 2.08
CCDC117-206ENST00000453543 PHEXP78562 749 aa28.04■■■□□ 2.08
CCDC117-206ENST00000453543 TRAF3Q13114 568 aa28.04■■■□□ 2.08
CCDC117-206ENST00000453543 ZNF766Q5HY98 468 aa28.04■■■□□ 2.08
CCDC117-206ENST00000453543 MDS2Q8NDY4 140 aa28.04■■■□□ 2.08
CCDC117-206ENST00000453543 SLX1AQ9BQ83 275 aa28.04■■■□□ 2.08
CCDC117-206ENST00000453543 ADAP2Q9NPF8 381 aa28.04■■■□□ 2.08
CCDC117-206ENST00000453543 OLAHQ9NV23 265 aa28.04■■■□□ 2.08
CCDC117-206ENST00000453543 TMEM216Q9P0N5 145 aa28.04■■■□□ 2.08
CCDC117-206ENST00000453543 PSMC3IPQ9P2W1 217 aaPredicted RBP28.04■■■□□ 2.08
CCDC117-206ENST00000453543 FETUBQ9UGM5 382 aa28.04■■■□□ 2.08
CCDC117-206ENST00000453543 ZNF223Q9UK11 482 aaPredicted RBP28.04■■■□□ 2.08
CCDC117-206ENST00000453543 SVILO95425 2214 aa28.04■■■□□ 2.08
CCDC117-206ENST00000453543 LDB3O75112 727 aa28.03■■■□□ 2.08
CCDC117-206ENST00000453543 PTX3P26022 381 aaPredicted RBP28.03■■■□□ 2.08
CCDC117-206ENST00000453543 TPP2P29144 1249 aaPredicted RBP28.03■■■□□ 2.08
CCDC117-206ENST00000453543 ID2Q02363 134 aa28.03■■■□□ 2.08
CCDC117-206ENST00000453543 SLAMF1Q13291 335 aa28.03■■■□□ 2.08
CCDC117-206ENST00000453543 ELOAQ14241 798 aaKnown RBP28.03■■■□□ 2.08
CCDC117-206ENST00000453543 OR1C1Q15619 314 aa28.03■■■□□ 2.08
CCDC117-206ENST00000453543 ZNF468Q5VIY5 522 aaPredicted RBP28.03■■■□□ 2.08
CCDC117-206ENST00000453543 ZNF324BQ6AW86 544 aaPredicted RBP28.03■■■□□ 2.08
CCDC117-206ENST00000453543 EIF1ADQ8N9N8 165 aaKnown RBP28.03■■■□□ 2.08
CCDC117-206ENST00000453543 CENPKQ9BS16 269 aa28.03■■■□□ 2.08
CCDC117-206ENST00000453543 NTMT1Q9BV86 223 aa28.03■■■□□ 2.08
CCDC117-206ENST00000453543 ZNF717Q9BY31 904 aaPredicted RBP28.03■■■□□ 2.08
CCDC117-206ENST00000453543 HES7Q9BYE0 225 aa28.03■■■□□ 2.08
CCDC117-206ENST00000453543 SEMA4BQ9NPR2 832 aaPredicted RBP28.03■■■□□ 2.08
CCDC117-206ENST00000453543 SPACA6W5XKT8 324 aa28.03■■■□□ 2.08
CCDC117-206ENST00000453543 IQANK1A0A1B0GTG1 560 aa28.02■■■□□ 2.08
CCDC117-206ENST00000453543 GOLGA8RI6L899 631 aa28.02■■■□□ 2.08
CCDC117-206ENST00000453543 RASAL1O95294 804 aa28.02■■■□□ 2.08
CCDC117-206ENST00000453543 IFNA16P05015 189 aa28.02■■■□□ 2.08
CCDC117-206ENST00000453543 EDN3P14138 238 aa28.02■■■□□ 2.08
CCDC117-206ENST00000453543 CPN2P22792 545 aa28.02■■■□□ 2.08
CCDC117-206ENST00000453543 MLF1P58340 268 aa28.02■■■□□ 2.08
CCDC117-206ENST00000453543 OC90Q02509 493 aaPredicted RBP28.02■■■□□ 2.08
CCDC117-206ENST00000453543 SRSF11Q05519 484 aaKnown RBP28.02■■■□□ 2.08
CCDC117-206ENST00000453543 SPINK14Q6IE38 97 aa28.02■■■□□ 2.08
CCDC117-206ENST00000453543 ZNF483Q8TF39 744 aaPredicted RBP28.02■■■□□ 2.08
CCDC117-206ENST00000453543 NCLNQ969V3 563 aa28.02■■■□□ 2.08
CCDC117-206ENST00000453543 MTFMTQ96DP5 389 aaKnown RBP28.02■■■□□ 2.08
CCDC117-206ENST00000453543 ALOXE3Q9BYJ1 711 aa28.02■■■□□ 2.08
CCDC117-206ENST00000453543 DEFB126Q9BYW3 111 aa28.02■■■□□ 2.08
CCDC117-206ENST00000453543 KLHL1Q9NR64 748 aa28.02■■■□□ 2.08
CCDC117-206ENST00000453543 TBK1Q9UHD2 729 aa28.02■■■□□ 2.08
CCDC117-206ENST00000453543 PPIEQ9UNP9 301 aaKnown RBP28.02■■■□□ 2.08
CCDC117-206ENST00000453543 A0A1B0GTL3 188 aa28.01■■■□□ 2.07
CCDC117-206ENST00000453543 FOXE1O00358 373 aaPredicted RBP28.01■■■□□ 2.07
CCDC117-206ENST00000453543 EEDO75530 441 aaKnown RBP28.01■■■□□ 2.07
CCDC117-206ENST00000453543 RNF224P0DH78 156 aa28.01■■■□□ 2.07
CCDC117-206ENST00000453543 TSPAN8P19075 237 aa28.01■■■□□ 2.07
CCDC117-206ENST00000453543 CLCN2P51788 898 aa28.01■■■□□ 2.07
CCDC117-206ENST00000453543 GPR143P51810 404 aa28.01■■■□□ 2.07
CCDC117-206ENST00000453543 PMP22Q01453 160 aa28.01■■■□□ 2.07
CCDC117-206ENST00000453543 STX4Q12846 297 aa28.01■■■□□ 2.07
CCDC117-206ENST00000453543 ELAVL1Q15717 326 aaKnown RBP28.01■■■□□ 2.07
CCDC117-206ENST00000453543 ZCCHC7Q8N3Z6 543 aaKnown RBP28.01■■■□□ 2.07
CCDC117-206ENST00000453543 THAP3Q8WTV1 239 aaPredicted RBP28.01■■■□□ 2.07
CCDC117-206ENST00000453543 MZB1Q8WU39 189 aa28.01■■■□□ 2.07
CCDC117-206ENST00000453543 ANKRD9Q96BM1 317 aaPredicted RBP28.01■■■□□ 2.07
CCDC117-206ENST00000453543 VMP1Q96GC9 406 aa28.01■■■□□ 2.07
CCDC117-206ENST00000453543 SPTAN1Q13813 2472 aaKnown RBP28.01■■■□□ 2.07
CCDC117-206ENST00000453543 BLACEA4D250 179 aa28■■■□□ 2.07
CCDC117-206ENST00000453543 PPP6CO00743 305 aa28■■■□□ 2.07
CCDC117-206ENST00000453543 SHBGP04278 402 aa28■■■□□ 2.07
CCDC117-206ENST00000453543 TDGF1P3P51864 188 aa28■■■□□ 2.07
CCDC117-206ENST00000453543 CDH13P55290 713 aa28■■■□□ 2.07
CCDC117-206ENST00000453543 HNRNPH2P55795 449 aaKnown RBP28■■■□□ 2.07
CCDC117-206ENST00000453543 CUL3Q13618 768 aa28■■■□□ 2.07
CCDC117-206ENST00000453543 ARMC10Q8N2F6 343 aa28■■■□□ 2.07
CCDC117-206ENST00000453543 OR4F6Q8NGB9 312 aa28■■■□□ 2.07
CCDC117-206ENST00000453543 NR4A3Q92570 626 aa28■■■□□ 2.07
CCDC117-206ENST00000453543 VTI1BQ9UEU0 232 aa28■■■□□ 2.07
CCDC117-206ENST00000453543 ATG4BQ9Y4P1 393 aa28■■■□□ 2.07
CCDC117-206ENST00000453543 POLEQ07864 2286 aa28■■■□□ 2.07
CCDC117-206ENST00000453543 PRKRAO75569 313 aaKnown RBP27.99■■■□□ 2.07
CCDC117-206ENST00000453543 NEURL1O76050 574 aa27.99■■■□□ 2.07
CCDC117-206ENST00000453543 BSGP35613 385 aa27.99■■■□□ 2.07
CCDC117-206ENST00000453543 ARFIP1P53367 373 aa27.99■■■□□ 2.07
CCDC117-206ENST00000453543 FAM219BQ5XKK7 198 aa27.99■■■□□ 2.07
CCDC117-206ENST00000453543 FRG2Q64ET8 278 aa27.99■■■□□ 2.07
CCDC117-206ENST00000453543 C18orf63Q68DL7 685 aa27.99■■■□□ 2.07
CCDC117-206ENST00000453543 GPR180Q86V85 440 aa27.99■■■□□ 2.07
CCDC117-206ENST00000453543 TMEM132CQ8N3T6 1108 aa27.99■■■□□ 2.07
CCDC117-206ENST00000453543 PTPMT1Q8WUK0 201 aaPredicted RBP27.99■■■□□ 2.07
CCDC117-206ENST00000453543 UBLCP1Q8WVY7 318 aaPredicted RBP27.99■■■□□ 2.07
CCDC117-206ENST00000453543 SCMH1Q96GD3 660 aa27.99■■■□□ 2.07
CCDC117-206ENST00000453543 FRG2BQ96QU4 278 aa27.99■■■□□ 2.07
CCDC117-206ENST00000453543 C1QTNF3Q9BXJ4 246 aa27.99■■■□□ 2.07
CCDC117-206ENST00000453543 PSD3Q9NYI0 1048 aa27.99■■■□□ 2.07
CCDC117-206ENST00000453543 LRFN1Q9P244 771 aa27.99■■■□□ 2.07
CCDC117-206ENST00000453543 PHF11Q9UIL8 331 aa27.99■■■□□ 2.07
CCDC117-206ENST00000453543 CLCA3PQ9Y6N3 262 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms