RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 ANKRD33Q7Z3H0 272 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 C17orf53Q8N3J3 647 aaPredicted RBP1.39□□□□□ -2.19
LRCH3-209ENST00000452660 OR6F1Q8NGZ6 308 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 NXPE2Q96DL1 559 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 MAGEB18Q96M61 343 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 NDNQ99608 321 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 HSD17B14Q9BPX1 270 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 MAPKAP1Q9BPZ7 522 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 DNAJC4Q9NNZ3 241 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 DHRS4-AS1Q9P1J3 65 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 ZNF215Q9UL58 517 aaPredicted RBP1.39□□□□□ -2.19
LRCH3-209ENST00000452660 MGAT4AQ9UM21 535 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 XRN1Q8IZH2 1706 aaKnown RBP1.39□□□□□ -2.19
LRCH3-209ENST00000452660 PARP4Q9UKK3 1724 aaKnown RBP1.39□□□□□ -2.19
LRCH3-209ENST00000452660 CACNA1BQ00975 2339 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 SBF1O95248 1867 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 CCDC88AQ3V6T2 1871 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 DCCP43146 1447 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 NCOA3Q9Y6Q9 1424 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 PAPPA2Q9BXP8 1791 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 GCC2Q8IWJ2 1684 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 KIAA1551Q9HCM1 1747 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 DHX29Q7Z478 1369 aaKnown RBP1.38□□□□□ -2.19
LRCH3-209ENST00000452660 PLEKHG1Q9ULL1 1385 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 LRRC37A3O60309 1634 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 TRAV9-2A0A087WT02 112 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 IGLON5A6NGN9 336 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 CCL24O00175 119 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 FBP2O00757 339 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 ZBED4O75132 1171 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 TSC22D2O75157 780 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 ATP5BP06576 529 aaKnown RBP1.38□□□□□ -2.19
LRCH3-209ENST00000452660 CSH1P0DML2 217 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 CSH2P0DML3 217 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 GCH1P30793 250 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 ALDH1B1P30837 517 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 MDH2P40926 338 aaKnown RBP1.38□□□□□ -2.19
LRCH3-209ENST00000452660 OR3A3P47888 321 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 FNTAP49354 379 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 NAP1L1P55209 391 aaKnown RBP1.38□□□□□ -2.19
LRCH3-209ENST00000452660 MAP2K1Q02750 393 aaPredicted RBP1.38□□□□□ -2.19
LRCH3-209ENST00000452660 MECOMQ03112 1051 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 PRPF4BQ13523 1007 aaKnown RBP1.38□□□□□ -2.19
LRCH3-209ENST00000452660 SHHQ15465 462 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 PTGISQ16647 500 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 GSG1Q2KHT4 349 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 VWC2Q2TAL6 325 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 Q6P435 159 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 RFWD3Q6PCD5 774 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 NUFIP2Q7Z417 695 aaKnown RBP1.38□□□□□ -2.19
LRCH3-209ENST00000452660 PRUNE1Q86TP1 453 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 ENTHD1Q8IYW4 607 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 RNF175Q8N4F7 328 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 SYT2Q8N9I0 419 aaPredicted RBP1.38□□□□□ -2.19
LRCH3-209ENST00000452660 NFAM1Q8NET5 270 aaPredicted RBP1.38□□□□□ -2.19
LRCH3-209ENST00000452660 SLC26A7Q8TE54 656 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 RNF138Q8WVD3 245 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 PTERQ96BW5 349 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 FAF2Q96CS3 445 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 ZBED6CLQ96FA7 236 aaPredicted RBP1.38□□□□□ -2.19
LRCH3-209ENST00000452660 RSRC1Q96IZ7 334 aaKnown RBP1.38□□□□□ -2.19
LRCH3-209ENST00000452660 ANKRD27Q96NW4 1050 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 NEDD4LQ96PU5 975 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 PCDHB18PQ96TA0 734 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 CTRCQ99895 268 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 HES7Q9BYE0 225 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 TRIM7Q9C029 511 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 KCNK13Q9HB14 408 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 NMUR1Q9HB89 426 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 AMBNQ9NP70 447 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 IARS2Q9NSE4 1012 aaKnown RBP1.38□□□□□ -2.19
LRCH3-209ENST00000452660 HAO2Q9NYQ3 351 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 RSPH14Q9UHP6 348 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 RAB26Q9ULW5 256 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 PPIEQ9UNP9 301 aaKnown RBP1.38□□□□□ -2.19
LRCH3-209ENST00000452660 RGPD8O14715 1765 aaPredicted RBP1.38□□□□□ -2.19
LRCH3-209ENST00000452660 COL14A1Q05707 1796 aaKnown RBP1.38□□□□□ -2.19
LRCH3-209ENST00000452660 SCN11AQ9UI33 1791 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 RIMS2Q9UQ26 1411 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 TTC28Q96AY4 2481 aa1.38□□□□□ -2.19
LRCH3-209ENST00000452660 TIAM2Q8IVF5 1701 aa1.37□□□□□ -2.19
LRCH3-209ENST00000452660 THSD7BQ9C0I4 1608 aa1.37□□□□□ -2.19
LRCH3-209ENST00000452660 EIF2AK4Q9P2K8 1649 aaKnown RBP1.37□□□□□ -2.19
LRCH3-209ENST00000452660 AKAP12Q02952 1782 aa1.37□□□□□ -2.19
LRCH3-209ENST00000452660 GLTPD2A6NH11 291 aa1.37□□□□□ -2.19
LRCH3-209ENST00000452660 SIGLEC5O15389 551 aa1.37□□□□□ -2.19
LRCH3-209ENST00000452660 EPB41L2O43491 1005 aaKnown RBP1.37□□□□□ -2.19
LRCH3-209ENST00000452660 ENTPD3O75355 529 aa1.37□□□□□ -2.19
LRCH3-209ENST00000452660 RHBDL1O75783 438 aa1.37□□□□□ -2.19
LRCH3-209ENST00000452660 ANGPTL1O95841 491 aa1.37□□□□□ -2.19
LRCH3-209ENST00000452660 GSRP00390 522 aa1.37□□□□□ -2.19
LRCH3-209ENST00000452660 IGLV1-47P01700 117 aa1.37□□□□□ -2.19
LRCH3-209ENST00000452660 SERPING1P05155 500 aa1.37□□□□□ -2.19
LRCH3-209ENST00000452660 GOT1P17174 413 aa1.37□□□□□ -2.19
LRCH3-209ENST00000452660 EPORP19235 508 aa1.37□□□□□ -2.19
LRCH3-209ENST00000452660 ACHEP22303 614 aa1.37□□□□□ -2.19
LRCH3-209ENST00000452660 RIPPLY3P57055 190 aa1.37□□□□□ -2.19
LRCH3-209ENST00000452660 PRKCEQ02156 737 aa1.37□□□□□ -2.19
LRCH3-209ENST00000452660 CKAP4Q07065 602 aaKnown RBP1.37□□□□□ -2.19
LRCH3-209ENST00000452660 CHAF1BQ13112 559 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms