RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 ROGDIQ9GZN7 287 aa11.53□□□□□ -0.56
CSNK1E-211ENST00000451964 OLAHQ9NV23 265 aa11.53□□□□□ -0.56
CSNK1E-211ENST00000451964 ADGRE2Q9UHX3 823 aa11.53□□□□□ -0.56
CSNK1E-211ENST00000451964 PCTPQ9UKL6 214 aa11.53□□□□□ -0.56
CSNK1E-211ENST00000451964 PCDHGA11Q9Y5H2 935 aa11.53□□□□□ -0.56
CSNK1E-211ENST00000451964 NBPF19A0A087WUL8 3843 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 WIPF3A6NGB9 483 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 STX16-NPEPL1H3BU86 382 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 PLPP1O14494 284 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 STX16O14662 325 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 PRKNO60260 465 aaPredicted RBP11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 UGDHO60701 494 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 LDB3O75112 727 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 NEURL1O76050 574 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 TPP2P29144 1249 aaPredicted RBP11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 SSR2P43308 183 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 TAS2R50P59544 299 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 ID2Q02363 134 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 TRAF3Q13114 568 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 SLAMF1Q13291 335 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 TERF2Q15554 542 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 TSNAXIP1Q2TAA8 658 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 FAM219BQ5XKK7 198 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 SUN3Q8TAQ9 357 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 PTPMT1Q8WUK0 201 aaPredicted RBP11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 NR4A3Q92570 626 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 RGMAQ96B86 450 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 ANKRD9Q96BM1 317 aaPredicted RBP11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 SCMH1Q96GD3 660 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 ALOXE3Q9BYJ1 711 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 DEFB126Q9BYW3 111 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 MRPL46Q9H2W6 279 aaKnown RBP11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 L2HGDHQ9H9P8 463 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 PRM3Q9NNZ6 103 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 KLHL1Q9NR64 748 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 TMEM216Q9P0N5 145 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 VTI1BQ9UEU0 232 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 FBXW2Q9UKT8 454 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 MRPS33Q9Y291 106 aaKnown RBP11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 DOPEY1Q5JWR5 2465 aa11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 SPTBN1Q01082 2364 aaKnown RBP11.52□□□□□ -0.57
CSNK1E-211ENST00000451964 MAST4O15021 2626 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 TRBV11-1A0A0K0K1C0 115 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 TMEM200CA6NKL6 621 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 WASHC1A8K0Z3 465 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 A8MT66 165 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 SMIM24O75264 130 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 EEDO75530 441 aaKnown RBP11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 RASAL1O95294 804 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 CLDN9O95484 217 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 RPS17P08708 135 aaKnown RBP11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 TSPAN8P19075 237 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 PTX3P26022 381 aaPredicted RBP11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 TRHRP34981 398 aaPredicted RBP11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 BSGP35613 385 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 CLCN2P51788 898 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 CDH13P55290 713 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 OC90Q02509 493 aaPredicted RBP11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 STX4Q12846 297 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 ELOAQ14241 798 aaKnown RBP11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 RCN2Q14257 317 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 ELAVL1Q15717 326 aaKnown RBP11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 INAQ16352 499 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 LGSNQ5TDP6 509 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 C16orf47Q6ZP98 133 aaPredicted RBP11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 OR4N5Q8IXE1 308 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 ZNF321PQ8N8H1 164 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 SSC4DQ8WTU2 575 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 THAP3Q8WTV1 239 aaPredicted RBP11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 MZB1Q8WU39 189 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 NCLNQ969V3 563 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 MTFMTQ96DP5 389 aaKnown RBP11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 NTMT1Q9BV86 223 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 TRIM45Q9H8W5 580 aaPredicted RBP11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 ADAP2Q9NPF8 381 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 SEMA4BQ9NPR2 832 aaPredicted RBP11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 PSD3Q9NYI0 1048 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 LRFN1Q9P244 771 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 ABI3Q9P2A4 366 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 TMCO1Q9UM00 188 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 OSGIN2Q9Y236 505 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 ATG4BQ9Y4P1 393 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 PCDHGB6Q9Y5F9 930 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 SCN2AQ99250 2005 aa11.51□□□□□ -0.57
CSNK1E-211ENST00000451964 FOXO6A8MYZ6 492 aa11.5□□□□□ -0.57
CSNK1E-211ENST00000451964 GOLGA8RI6L899 631 aa11.5□□□□□ -0.57
CSNK1E-211ENST00000451964 FOXE1O00358 373 aaPredicted RBP11.5□□□□□ -0.57
CSNK1E-211ENST00000451964 TMPRSS11DO60235 418 aa11.5□□□□□ -0.57
CSNK1E-211ENST00000451964 FGF17O60258 216 aa11.5□□□□□ -0.57
CSNK1E-211ENST00000451964 PRKRAO75569 313 aaKnown RBP11.5□□□□□ -0.57
CSNK1E-211ENST00000451964 LDLRP01130 860 aa11.5□□□□□ -0.57
CSNK1E-211ENST00000451964 IFNA16P05015 189 aa11.5□□□□□ -0.57
CSNK1E-211ENST00000451964 SP1P08047 785 aa11.5□□□□□ -0.57
CSNK1E-211ENST00000451964 CPN2P22792 545 aa11.5□□□□□ -0.57
CSNK1E-211ENST00000451964 HLCSP50747 726 aa11.5□□□□□ -0.57
CSNK1E-211ENST00000451964 CCNG1P51959 295 aa11.5□□□□□ -0.57
CSNK1E-211ENST00000451964 RAP1GDS1P52306 607 aa11.5□□□□□ -0.57
CSNK1E-211ENST00000451964 HNRNPH2P55795 449 aaKnown RBP11.5□□□□□ -0.57
CSNK1E-211ENST00000451964 KCNK10P57789 538 aa11.5□□□□□ -0.57
CSNK1E-211ENST00000451964 CUL3Q13618 768 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms