RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 IGKV3D-11A0A0A0MRZ8 115 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 TCRBV16S1A1N1A0A5B0 115 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 OR5H15A6NDH6 313 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 C19orf84I3L1E1 186 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 SAP18O00422 153 aaKnown RBP16.39■□□□□ 0.21
FAM3A-216ENST00000449971 RTCAO00442 366 aaKnown RBP16.39■□□□□ 0.21
FAM3A-216ENST00000449971 RASAL1O95294 804 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 SIX3O95343 332 aaPredicted RBP16.39■□□□□ 0.21
FAM3A-216ENST00000449971 SNRPAP09012 282 aaKnown RBP16.39■□□□□ 0.21
FAM3A-216ENST00000449971 FAM153BP0C7A2 387 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 MYBL2P10244 700 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 COL6A2P12110 1019 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 SERPINB1P30740 379 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 ST13P50502 369 aaKnown RBP16.39■□□□□ 0.21
FAM3A-216ENST00000449971 LIM2P55344 173 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 RBPJQ06330 500 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 SLC13A2Q13183 592 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 GTF2H2Q13888 395 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 RCN2Q14257 317 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 MEP1AQ16819 746 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 TSNAXIP1Q2TAA8 658 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 AP5B1Q2VPB7 878 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 FAM153CQ494X1 144 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 TMEM35AQ53FP2 167 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 LIPJQ5W064 366 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 GTF2H2CQ6P1K8 395 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 GOLGA7Q7Z5G4 137 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 UBE3DQ7Z6J8 389 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 CRLF3Q8IUI8 442 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 BEST3Q8N1M1 668 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 SLC5A8Q8N695 610 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 PTGR2Q8N8N7 351 aaPredicted RBP16.39■□□□□ 0.21
FAM3A-216ENST00000449971 ADAMTS18Q8TE60 1221 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 PHF21BQ96EK2 531 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 CMTM7Q96FZ5 175 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 TBCDQ9BTW9 1192 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 OR51B5Q9H339 312 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 IPPKQ9H8X2 491 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 PNO1Q9NRX1 252 aaKnown RBP16.39■□□□□ 0.21
FAM3A-216ENST00000449971 ABI3Q9P2A4 366 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 ADGRE2Q9UHX3 823 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 TINAGQ9UJW2 476 aa16.39■□□□□ 0.21
FAM3A-216ENST00000449971 MRPS33Q9Y291 106 aaKnown RBP16.39■□□□□ 0.21
FAM3A-216ENST00000449971 SAGE2PA6NJ88 616 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 RIPK2O43353 540 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 SMIM24O75264 130 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 ABHD2P08910 425 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 ATP5A1P25705 553 aaKnown RBP16.38■□□□□ 0.21
FAM3A-216ENST00000449971 EEF1DP29692 281 aaKnown RBP16.38■□□□□ 0.21
FAM3A-216ENST00000449971 SSTR2P30874 369 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 ARL1P40616 181 aaPredicted RBP16.38■□□□□ 0.21
FAM3A-216ENST00000449971 PIK3CGP48736 1102 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 HNRNPFP52597 415 aaKnown RBP16.38■□□□□ 0.21
FAM3A-216ENST00000449971 HSD17B7P56937 341 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 ADORA2A-AS1P86434 159 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 C3AR1Q16581 482 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 KHDRBS2Q5VWX1 349 aaKnown RBP16.38■□□□□ 0.21
FAM3A-216ENST00000449971 CLNKQ7Z7G1 428 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 CDH24Q86UP0 819 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 ZNF595Q8IYB9 648 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 RNF175Q8N4F7 328 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 KIF2BQ8N4N8 673 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 ACOT4Q8N9L9 421 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 LRRN4CLQ8ND94 238 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 TMEM52Q8NDY8 209 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 HUS1BQ8NHY5 278 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 ATP6V1E2Q96A05 226 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 CDCP1Q9H5V8 836 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 TMCO1Q9UM00 188 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 DAPP1Q9UN19 280 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 PCDHGA11Q9Y5H2 935 aa16.38■□□□□ 0.21
FAM3A-216ENST00000449971 CYR61O00622 381 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 MAN1A2O60476 641 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 PRAMEF2O60811 474 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 WISP2O76076 250 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 CRYABP02511 175 aaKnown RBP16.37■□□□□ 0.21
FAM3A-216ENST00000449971 CDSNQ15517 529 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 INAQ16352 499 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 CPSF6Q16630 551 aaKnown RBP eCLIP16.37■□□□□ 0.21
FAM3A-216ENST00000449971 DEPDC1Q5TB30 811 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 METTL2BQ6P1Q9 378 aaKnown RBP16.37■□□□□ 0.21
FAM3A-216ENST00000449971 XKRXQ6PP77 449 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 ZNF793Q6ZN11 406 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 RPS19BP1Q86WX3 136 aaKnown RBP16.37■□□□□ 0.21
FAM3A-216ENST00000449971 SCUBE1Q8IWY4 988 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 NFAM1Q8NET5 270 aaPredicted RBP16.37■□□□□ 0.21
FAM3A-216ENST00000449971 ELP5Q8TE02 316 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 REPS1Q96D71 796 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 CSF3RQ99062 836 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 MTERF1Q99551 399 aaKnown RBP16.37■□□□□ 0.21
FAM3A-216ENST00000449971 NPAS2Q99743 824 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 UTP23Q9BRU9 249 aaKnown RBP16.37■□□□□ 0.21
FAM3A-216ENST00000449971 NOL11Q9H8H0 719 aaKnown RBP16.37■□□□□ 0.21
FAM3A-216ENST00000449971 LYRM4Q9HD34 91 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 ANKRD10Q9NXR5 420 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 KCMF1Q9P0J7 381 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 XPR1Q9UBH6 696 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 RNF11Q9Y3C5 154 aa16.37■□□□□ 0.21
FAM3A-216ENST00000449971 NAV3Q8IVL0 2385 aa16.36■□□□□ 0.21
FAM3A-216ENST00000449971 MYOCOSA0A1B0GUC4 107 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms