RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 PTCHD1Q96NR3 888 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 AARSD1Q9BTE6 412 aaKnown RBP6.74□□□□□ -1.33
RBM39-218ENST00000449489 LRRC40Q9H9A6 602 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 FAM114A2Q9NRY5 505 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 ZNF701Q9NV72 531 aaPredicted RBP6.74□□□□□ -1.33
RBM39-218ENST00000449489 ALKBH4Q9NXW9 302 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 SPRR3Q9UBC9 169 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 NDRG3Q9UGV2 375 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 TAC3Q9UHF0 121 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 DRG1Q9Y295 367 aaKnown RBP6.74□□□□□ -1.33
RBM39-218ENST00000449489 NAALAD2Q9Y3Q0 740 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.74□□□□□ -1.335e-18■■■■□ 21.6
RBM39-218ENST00000449489 NBEAL2Q6ZNJ1 2754 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 hCG_1818297A0A087WSY0 165 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 TRBV11-1A0A0K0K1C0 115 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 ATP6AP2A0A1C7CYW4 349 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 KRT87PA6NCN2 255 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 MBD3L3A6NE82 208 aaPredicted RBP6.73□□□□□ -1.33
RBM39-218ENST00000449489 OR51F1A6NGY5 319 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 CD8B2A6NJW9 211 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 H7BY64 318 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 GSC2O15499 205 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 PSTPIP1O43586 416 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 CD5LO43866 347 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 GALR3O60755 368 aaPredicted RBP6.73□□□□□ -1.33
RBM39-218ENST00000449489 PSIP1O75475 530 aaKnown RBP6.73□□□□□ -1.33
RBM39-218ENST00000449489 ATP6AP2O75787 350 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 GOT2P00505 430 aaKnown RBP6.73□□□□□ -1.33
RBM39-218ENST00000449489 TP53P04637 393 aaPredicted RBP6.73□□□□□ -1.33
RBM39-218ENST00000449489 CHRM3P20309 590 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 RPS3P23396 243 aaKnown RBP eCLIP6.73□□□□□ -1.33
RBM39-218ENST00000449489 TTPAP49638 278 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 ETFDHQ16134 617 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 PARP6Q2NL67 630 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 KRTAP24-1Q3LI83 254 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 CCDC38Q502W7 563 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.73□□□□□ -1.33
RBM39-218ENST00000449489 IL20RBQ6UXL0 311 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 RTL4Q6ZR62 310 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 ZNF534Q76KX8 674 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 ADCK2Q7Z695 626 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 PLD3Q8IV08 490 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 RHOT2Q8IXI1 618 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 LRRC56Q8IYG6 542 aaPredicted RBP6.73□□□□□ -1.33
RBM39-218ENST00000449489 PM20D2Q8IYS1 436 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 MBD3L2Q8NHZ7 208 aaPredicted RBP6.73□□□□□ -1.33
RBM39-218ENST00000449489 NEIL3Q8TAT5 605 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 SLC35G2Q8TBE7 412 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 SKA2Q8WVK7 121 aaPredicted RBP6.73□□□□□ -1.33
RBM39-218ENST00000449489 ASB15Q8WXK1 588 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 IQCDQ96DY2 449 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 ZFP3Q96NJ6 502 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 PRAP1Q96NZ9 151 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 CCDC77Q9BR77 488 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 ASPNQ9BXN1 380 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 AMBRA1Q9C0C7 1298 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 P2RY12Q9H244 342 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 CALHM2Q9HA72 323 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 ANO10Q9NW15 660 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 MYOTQ9UBF9 498 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 ZNF223Q9UK11 482 aaPredicted RBP6.73□□□□□ -1.33
RBM39-218ENST00000449489 CDC42EP3Q9UKI2 254 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 FBXW2Q9UKT8 454 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 ALPK2Q86TB3 2170 aa6.73□□□□□ -1.33
RBM39-218ENST00000449489 KMT2CQ8NEZ4 4911 aaKnown RBP6.72□□□□□ -1.33
RBM39-218ENST00000449489 NCKAP5O14513 1909 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 A0A0G2JMM0 328 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 A0A1W2PPB8 328 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 A0A1W2PRS3 328 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 TLDC2A0PJX2 215 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 KIR3DP1A8MWS1 328 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 H7C0C1 242 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 PSMD3O43242 534 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 CTIFO43310 598 aaKnown RBP6.72□□□□□ -1.33
RBM39-218ENST00000449489 CHST10O43529 356 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 OR2J2O76002 312 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 UBOX5O94941 541 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 OR6B1O95007 311 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 SLC16A8O95907 504 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 CATP04040 527 aaKnown RBP6.72□□□□□ -1.33
RBM39-218ENST00000449489 SLC35G6P0C7Q6 338 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 CTNNA2P26232 953 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 MC3RP41968 323 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 ATP5OP48047 213 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 ADARP55265 1226 aaKnown RBP6.72□□□□□ -1.33
RBM39-218ENST00000449489 EEF1A1P68104 462 aaKnown RBP6.72□□□□□ -1.33
RBM39-218ENST00000449489 ZBED6P86452 979 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 TNK1Q13470 666 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 SPARCL1Q14515 664 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 TCEAL1Q15170 157 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 RPS6KA1Q15418 735 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 SLC18A3Q16572 532 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 CPSF6Q16630 551 aaKnown RBP eCLIP6.72□□□□□ -1.33
RBM39-218ENST00000449489 CYP27C1Q4G0S4 372 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 FASTKD1Q53R41 847 aaKnown RBP6.72□□□□□ -1.33
RBM39-218ENST00000449489 XKR6Q5GH73 641 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 EEF1A1P5Q5VTE0 462 aa6.72□□□□□ -1.33
RBM39-218ENST00000449489 PTRHD1Q6GMV3 140 aaKnown RBP6.72□□□□□ -1.33
RBM39-218ENST00000449489 CAPN13Q6MZZ7 669 aaPredicted RBP6.72□□□□□ -1.33
RBM39-218ENST00000449489 FAM47EQ6ZV65 393 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms