RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 KRT84Q9NSB2 600 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 ASIC5Q9NY37 505 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 KCNMB2Q9Y691 235 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 TRAV6A0A075B6T7 132 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 A0A1W2PPL8 197 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 EPB42P16452 691 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 C1orf53Q5VUE5 145 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 MZT2BQ6NZ67 158 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 CEP68Q76N32 757 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 COL21A1Q96P44 957 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 PELOQ9BRX2 385 aaKnown RBP12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 GSX2Q9BZM3 304 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 IPPKQ9H8X2 491 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 MKL2Q9ULH7 1088 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 LIPT1Q9Y234 373 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 GBF1Q92538 1859 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 SLC35F4A4IF30 521 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 LRRC72A6NJI9 287 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 GJB5O95377 273 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 MC4RP32245 332 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 ABATP80404 500 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 CACNG1Q06432 222 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 TSTQ16762 297 aaKnown RBP12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 ZNF548Q8NEK5 533 aaPredicted RBP12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 C9orf43Q8TAL5 461 aaPredicted RBP12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 GGHQ92820 318 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 NELL1Q92832 810 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 DEFB118Q96PH6 123 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 TRPS1Q9UHF7 1281 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 ADAM30Q9UKF2 790 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 PCDHGA9Q9Y5G4 932 aaKnown RBP12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 hCG_1807616A0A1W2PRN6 198 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 CCL22O00626 93 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 SEC14L5O43304 696 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 ZNF682O95780 498 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 KLKB1P03952 638 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 CCL23P55773 120 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 MED22Q15528 200 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 ZNF284Q2VY69 593 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 FAM174BQ3ZCQ3 159 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 MPP7Q5T2T1 576 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 RBFAQ8N0V3 343 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 EFHBQ8N7U6 833 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 OR9Q1Q8NGQ5 310 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 UPRTQ96BW1 309 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 TOX2Q96NM4 488 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 ABCB9Q9NP78 766 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 RBFOX1Q9NWB1 397 aaKnown RBP12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 SPASTQ9UBP0 616 aa12.9□□□□□ -0.34
SYNGAP1-204ENST00000449372 ANKRD36A6QL64 1941 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 A0A0A6YYJ9 748 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 LRRC14BA6NHZ5 514 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 CLCA1A8K7I4 914 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 HMBSP08397 361 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 CNPP09543 421 aaKnown RBP12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 HOXA9P31269 272 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 TGM4P49221 684 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 SNX20Q7Z614 316 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 CHPFQ8IZ52 775 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 CLRN3Q8NCR9 226 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 PIP5K1AQ99755 562 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 SORBS1Q9BX66 1292 aaKnown RBP12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 GPR63Q9BZJ6 419 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 GABARAPL1Q9H0R8 117 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 PIGUQ9H490 435 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 GPR83Q9NYM4 423 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 KCTD3Q9Y597 815 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 H3BM21 787 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 INSIG1O15503 277 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 COCHO43405 550 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 SERPINA1P01009 418 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 FABP3P05413 133 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 SRCP12931 536 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 SSTR2P30874 369 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 NUDT6P53370 316 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 GHDCQ8N2G8 530 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 SLC5A11Q8WWX8 675 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 SMG7Q92540 1137 aaKnown RBP12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 CRELD1Q96HD1 420 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 RBP7Q96R05 134 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 CRISPLD2Q9H0B8 497 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 SDHAF2Q9NX18 166 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 TBX21Q9UL17 535 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 ZNF490Q9ULM2 529 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 GPX5O75715 221 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 VIPP01282 170 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 EBLN1P0CF75 366 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 PSMA3P25788 255 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 ZNF81P51508 661 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 ZNF177Q13360 481 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 RUNDC3AQ59EK9 446 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 CARD16Q5EG05 197 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 C17orf107Q6ZR85 190 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 GOLGA7Q7Z5G4 137 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 ADGRD2Q7Z7M1 963 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 TMEM150AQ86TG1 271 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 LRRC17Q8N6Y2 441 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 DHRS7Q9Y394 339 aa12.89□□□□□ -0.35
SYNGAP1-204ENST00000449372 SAMHD1Q9Y3Z3 626 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms