RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 ZNF24P17028 368 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 ATF6P18850 670 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 MNDAP41218 407 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 NRIP1P48552 1158 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 CD83Q01151 205 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 CLCA4Q14CN2 919 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 SMN1Q16637 294 aaKnown RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 AAK1Q2M2I8 961 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 RNF175Q8N4F7 328 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 MINDY2Q8NBR6 621 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 OR5P2Q8WZ92 322 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 SGCDQ92629 289 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 TMEM80Q96HE8 168 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 CASD1Q96PB1 797 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 TMED9Q9BVK6 235 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 ELL3Q9HB65 397 aaPredicted RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 TMEM30AQ9NV96 361 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 MRTO4Q9UKD2 239 aaKnown RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 MGAT4BQ9UQ53 548 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 F5P12259 2224 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 AKAP8O43823 692 aaKnown RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 LCKP06239 509 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 SDC1P18827 310 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 CD72P21854 359 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 NDUFS1P28331 727 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 AKT2P31751 481 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 VIPR2P41587 438 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 GRK6P43250 576 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 MLLT10P55197 1068 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 CSTF1Q05048 431 aaKnown RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 SELPLGQ14242 412 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 NFE2L1Q14494 772 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 DHCR24Q15392 516 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 ALG11Q2TAA5 492 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 SLC36A3Q495N2 470 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 CTSL3PQ5NE16 218 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 SLC35F1Q5T1Q4 408 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 PRPF38BQ5VTL8 546 aaKnown RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 ZNF776Q68DI1 518 aaPredicted RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 ASB18Q6ZVZ8 466 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 C6orf120Q7Z4R8 191 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 TCEAL8Q8IYN2 117 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 NAGSQ8N159 534 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 CBARPQ8N350 705 aaPredicted RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 TMEM102Q8N9M5 508 aaPredicted RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 ABHD11Q8NFV4 315 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 OR7G3Q8NG95 312 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 OR56A1Q8NGH5 318 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 HMGB4Q8WW32 186 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 KCNN1Q92952 543 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 ZNF689Q96CS4 500 aaPredicted RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 SLC38A3Q99624 504 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 PIP5K1AQ99755 562 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 CLSTN3Q9BQT9 956 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 MND1Q9BWT6 205 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 ASPNQ9BXN1 380 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 MAGIXQ9H6Y5 334 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 ANKHQ9HCJ1 492 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 NECTIN3Q9NQS3 549 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 UCKL1Q9NWZ5 548 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 STOX2Q9P2F5 926 aaPredicted RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 WDR45Q9Y484 360 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 PCDHGA8Q9Y5G5 932 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 FEZF1A0PJY2 475 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 ZNF860A6NHJ4 632 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 UBFD1O14562 309 aaKnown RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 SCAMP2O15127 329 aaKnown RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 GSTM2P28161 218 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 CLCN2P51788 898 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 RELAQ04206 551 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 ELAVL3Q14576 367 aaKnown RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 LIN54Q6MZP7 749 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 ZNF551Q7Z340 670 aaPredicted RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 COMMD6Q7Z4G1 85 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 LINC00471Q8N535 108 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 CAMKVQ8NCB2 501 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 PXYLP1Q8TE99 480 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 RPL3LQ92901 407 aaKnown RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 TEX37Q96LM6 180 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 BIRC8Q96P09 236 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 MGLLQ99685 303 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 MCHR1Q99705 422 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 GAL3ST1Q99999 423 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 SLC30A2Q9BRI3 323 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 NPLQ9BXD5 320 aaPredicted RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 ACPTQ9BZG2 426 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 MMP27Q9H306 513 aa6.86□□□□□ -1.31
BEST1-202ENST00000449131 RABL2AQ9UBK7 228 aaPredicted RBP6.86□□□□□ -1.31
BEST1-202ENST00000449131 A0A1W2PP55 124 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 FAM172BPA6NC97 362 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 ARNTLO00327 626 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 CCRL2O00421 344 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 TNFRSF10BO14763 440 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 AREL1O15033 823 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 ORC5O43913 435 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 RETP07949 1114 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 SLC2A2P11168 524 aaPredicted RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 C6P13671 934 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 S100A1P23297 94 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 CCR7P32248 378 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms