RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 VTI1BQ9UEU0 232 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 TEKT2Q9UIF3 430 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 PCDHGB6Q9Y5F9 930 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 UNC79Q9P2D8 2635 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 TMEM200CA6NKL6 621 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 A8MT66 165 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 CDK2AP1O14519 115 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 DLX3O60479 287 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 PRAMEF2O60811 474 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 WISP2O76076 250 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 SHBGP04278 402 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 MLF1P58340 268 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 IGLV3-21P80748 117 aaPredicted RBP13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 NR6A1Q15406 480 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 MEP1AQ16819 746 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 LCA5Q86VQ0 697 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 ZCCHC7Q8N3Z6 543 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 ARMC2Q8NEN0 867 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 B3GNT7Q8NFL0 401 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 ACMSDQ8TDX5 336 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 SIGLEC12Q96PQ1 595 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 PSMG3-AS1Q96PY0 264 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 ALOXE3Q9BYJ1 711 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 CDCP1Q9H5V8 836 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 MRPS33Q9Y291 106 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 ATG4BQ9Y4P1 393 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 ASB4Q9Y574 426 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 DIDO1Q9BTC0 2240 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 CPAMD8Q8IZJ3 1885 aa13.14□□□□□ -0.31
RTFDC1-204ENST00000449062 A0A1W2PPM1 405 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 WIPF3A6NGB9 483 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 WASHC1A8K0Z3 465 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 FOXO6A8MYZ6 492 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 PROM1O43490 865 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 SMIM24O75264 130 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 SEMA7AO75326 666 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 EEDO75530 441 aaKnown RBP13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 NEURL1O76050 574 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 TRHRP34981 398 aaPredicted RBP13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 HSD17B3P37058 310 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 ST13P50502 369 aaKnown RBP13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 CDH13P55290 713 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 SLC13A2Q13183 592 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 SLAMF1Q13291 335 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 DDX39BQ13838 428 aaKnown RBP13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 RCN2Q14257 317 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 RASA2Q15283 850 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 GGTA1PQ4G0N0 100 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 UNC50Q53HI1 259 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 FRG2Q64ET8 278 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 SPINK14Q6IE38 97 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 TDRPQ86YL5 185 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 MYLK4Q86YV6 388 aaPredicted RBP13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 SLC5A8Q8N695 610 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 ST6GALNAC3Q8NDV1 305 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 REPS1Q96D71 796 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 MAGEB10Q96LZ2 347 aaPredicted RBP13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 FRG2BQ96QU4 278 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 SLC29A3Q9BZD2 475 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 COPS7BQ9H9Q2 264 aaPredicted RBP13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 PNO1Q9NRX1 252 aaKnown RBP13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 AGPAT4Q9NRZ5 378 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 PSMC3IPQ9P2W1 217 aaPredicted RBP13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 EMCNQ9ULC0 261 aa13.13□□□□□ -0.31
RTFDC1-204ENST00000449062 A0A0A6YYD5 115 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 IQANK1A0A1B0GTG1 560 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 MYOCOSA0A1B0GUC4 107 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 BLACEA4D250 179 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 ANKUB1A6NFN9 424 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 GABRR3A8MPY1 467 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 TMPRSS11DO60235 418 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 PRKNO60260 465 aaPredicted RBP13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 LDB3O75112 727 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 MYO1DO94832 1006 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 PYGBP11216 843 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 IMPDH1P20839 514 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 SSR2P43308 183 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 TDGF1P3P51864 188 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 CCNG1P51959 295 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 HNRNPH2P55795 449 aaKnown RBP13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 ELAVL1Q15717 326 aaKnown RBP13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 INAQ16352 499 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 TEX35Q5T0J7 233 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 FAM219BQ5XKK7 198 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 MILR1Q7Z6M3 343 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 CLNKQ7Z7G1 428 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 GPR180Q86V85 440 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 CNPY4Q8N129 248 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 MYRIPQ8NFW9 859 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 OR4F6Q8NGB9 312 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 MTFMTQ96DP5 389 aaKnown RBP13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 SCMH1Q96GD3 660 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 DEFB126Q9BYW3 111 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 ADAP2Q9NPF8 381 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 SEMA4BQ9NPR2 832 aaPredicted RBP13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 FBXW2Q9UKT8 454 aa13.12□□□□□ -0.31
RTFDC1-204ENST00000449062 A0A1W2PR48 441 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 SYNDIG1LA6NDD5 238 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms