RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 ARMC10Q8N2F6 343 aa18.37■□□□□ 0.53
VCP-203ENST00000448530 MMGT1Q8N4V1 131 aa18.37■□□□□ 0.53
VCP-203ENST00000448530 C7orf57Q8NEG2 295 aa18.37■□□□□ 0.53
VCP-203ENST00000448530 GPR137Q96N19 417 aa18.37■□□□□ 0.53
VCP-203ENST00000448530 ALOXE3Q9BYJ1 711 aa18.37■□□□□ 0.53
VCP-203ENST00000448530 TRIM45Q9H8W5 580 aaPredicted RBP18.37■□□□□ 0.53
VCP-203ENST00000448530 ACTR8Q9H981 624 aa18.37■□□□□ 0.53
VCP-203ENST00000448530 CPSF2Q9P2I0 782 aaKnown RBP18.37■□□□□ 0.53
VCP-203ENST00000448530 NPIPA1Q9UND3 350 aa18.37■□□□□ 0.53
VCP-203ENST00000448530 PPIEQ9UNP9 301 aaKnown RBP18.37■□□□□ 0.53
VCP-203ENST00000448530 KLF13Q9Y2Y9 288 aaPredicted RBP18.37■□□□□ 0.53
VCP-203ENST00000448530 PCDHGA11Q9Y5H2 935 aa18.37■□□□□ 0.53
VCP-203ENST00000448530 NOTCH2Q04721 2471 aa18.37■□□□□ 0.53
VCP-203ENST00000448530 RTCAO00442 366 aaKnown RBP18.36■□□□□ 0.53
VCP-203ENST00000448530 ITGA10O75578 1167 aa18.36■□□□□ 0.53
VCP-203ENST00000448530 ACSL3O95573 720 aa18.36■□□□□ 0.53
VCP-203ENST00000448530 MTHFD2P13995 350 aa18.36■□□□□ 0.53
VCP-203ENST00000448530 ZNF24P17028 368 aa18.36■□□□□ 0.53
VCP-203ENST00000448530 HIST1H1TP22492 207 aaPredicted RBP18.36■□□□□ 0.53
VCP-203ENST00000448530 CA7P43166 264 aa18.36■□□□□ 0.53
VCP-203ENST00000448530 PIK3CGP48736 1102 aa18.36■□□□□ 0.53
VCP-203ENST00000448530 SERTAD2Q14140 314 aa18.36■□□□□ 0.53
VCP-203ENST00000448530 UBE3DQ7Z6J8 389 aa18.36■□□□□ 0.53
VCP-203ENST00000448530 RELL1Q8IUW5 271 aa18.36■□□□□ 0.53
VCP-203ENST00000448530 CYP4Z2PQ8N1L4 340 aa18.36■□□□□ 0.53
VCP-203ENST00000448530 RGMAQ96B86 450 aa18.36■□□□□ 0.53
VCP-203ENST00000448530 REPS1Q96D71 796 aa18.36■□□□□ 0.53
VCP-203ENST00000448530 FMO2Q99518 471 aa18.36■□□□□ 0.53
VCP-203ENST00000448530 MAPKAP1Q9BPZ7 522 aa18.36■□□□□ 0.53
VCP-203ENST00000448530 OR51B5Q9H339 312 aa18.36■□□□□ 0.53
VCP-203ENST00000448530 KCMF1Q9P0J7 381 aa18.36■□□□□ 0.53
VCP-203ENST00000448530 TNPO3Q9Y5L0 923 aaKnown RBP18.36■□□□□ 0.53
VCP-203ENST00000448530 TEX15Q9BXT5 2789 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 HMX2A2RU54 273 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 KLRC4-KLRK1H3BQV0 150 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 SAP18O00422 153 aaKnown RBP18.35■□□□□ 0.53
VCP-203ENST00000448530 CTAGE8P0CG41 777 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 ESRRAP11474 423 aaPredicted RBP18.35■□□□□ 0.53
VCP-203ENST00000448530 CPN2P22792 545 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 ARL1P40616 181 aaPredicted RBP18.35■□□□□ 0.53
VCP-203ENST00000448530 PIK3CBP42338 1070 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 SSR4P51571 173 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 DEPDC1Q5TB30 811 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 LIPJQ5W064 366 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 OR4C11Q6IEV9 310 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 HSDL2Q6YN16 418 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 ZNF793Q6ZN11 406 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 CTAGE4Q8IX94 777 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 POGLUT1Q8NBL1 392 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 MORN4Q8NDC4 146 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 OR14A16Q8NHC5 309 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 HUS1BQ8NHY5 278 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 CDC42EP4Q9H3Q1 356 aaKnown RBP18.35■□□□□ 0.53
VCP-203ENST00000448530 MS4A12Q9NXJ0 267 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 VTI1BQ9UEU0 232 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 ERVK-11Q9UQG0 969 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 YARS2Q9Y2Z4 477 aaKnown RBP18.35■□□□□ 0.53
VCP-203ENST00000448530 CLDN16Q9Y5I7 305 aa18.35■□□□□ 0.53
VCP-203ENST00000448530 MYOCOSA0A1B0GUC4 107 aa18.34■□□□□ 0.53
VCP-203ENST00000448530 ASNA1O43681 348 aa18.34■□□□□ 0.53
VCP-203ENST00000448530 LDB3O75112 727 aa18.34■□□□□ 0.53
VCP-203ENST00000448530 ALDOAP04075 364 aaKnown RBP18.34■□□□□ 0.53
VCP-203ENST00000448530 COX7A2P14406 83 aa18.34■□□□□ 0.53
VCP-203ENST00000448530 SERPINB9P50453 376 aa18.34■□□□□ 0.53
VCP-203ENST00000448530 GPR143P51810 404 aa18.34■□□□□ 0.53
VCP-203ENST00000448530 SLAMF1Q13291 335 aa18.34■□□□□ 0.53
VCP-203ENST00000448530 GTF2H2Q13888 395 aa18.34■□□□□ 0.53
VCP-203ENST00000448530 GLE1Q53GS7 698 aaKnown RBP18.34■□□□□ 0.53
VCP-203ENST00000448530 GTF2H2CQ6P1K8 395 aa18.34■□□□□ 0.53
VCP-203ENST00000448530 SLC34A3Q8N130 599 aa18.34■□□□□ 0.53
VCP-203ENST00000448530 GHDCQ8N2G8 530 aa18.34■□□□□ 0.53
VCP-203ENST00000448530 CPSF7Q8N684 471 aaKnown RBP18.34■□□□□ 0.53
VCP-203ENST00000448530 MTERF1Q99551 399 aaKnown RBP18.34■□□□□ 0.53
VCP-203ENST00000448530 OR8D2Q9GZM6 311 aa18.34■□□□□ 0.53
VCP-203ENST00000448530 IPPKQ9H8X2 491 aa18.34■□□□□ 0.53
VCP-203ENST00000448530 TIMMDC1Q9NPL8 285 aa18.34■□□□□ 0.53
VCP-203ENST00000448530 DMGDHQ9UI17 866 aaKnown RBP18.34■□□□□ 0.53
VCP-203ENST00000448530 ZNF223Q9UK11 482 aaPredicted RBP18.34■□□□□ 0.53
VCP-203ENST00000448530 CACNA1DQ01668 2161 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 C17orf105B2RV13 164 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 DYRK3O43781 588 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 UGDHO60701 494 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 KRT38O76015 456 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 SCELO95171 688 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 RBP1P09455 135 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 ABOP16442 354 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 PTX3P26022 381 aaPredicted RBP18.33■□□□□ 0.52
VCP-203ENST00000448530 TLX1P31314 330 aaPredicted RBP18.33■□□□□ 0.52
VCP-203ENST00000448530 MEOX1P50221 254 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 PCBP2Q15366 365 aaKnown RBP eCLIP18.33■□□□□ 0.52
VCP-203ENST00000448530 METTL2BQ6P1Q9 378 aaKnown RBP18.33■□□□□ 0.52
VCP-203ENST00000448530 RPTNQ6XPR3 784 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 ZNF227Q86WZ6 799 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 SPPL2CQ8IUH8 684 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 NOA1Q8NC60 698 aaKnown RBP18.33■□□□□ 0.52
VCP-203ENST00000448530 PTPMT1Q8WUK0 201 aaPredicted RBP18.33■□□□□ 0.52
VCP-203ENST00000448530 SLC44A1Q8WWI5 657 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 ASB15Q8WXK1 588 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 ATP6V1E2Q96A05 226 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 CCDC120Q96HB5 630 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms