RNA–Protein interactions for RNA: ENST00000448394.2

RANBP1-211, Transcript of RAN binding protein 1, human

TSL 2

Gene RANBP1, Length 688 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP1-211	ENST00000448394	CPN2	P22792	545 aa		13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	BSG	P35613	385 aa		13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	TNFRSF17	Q02223	184 aa		13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	ZNF33B	Q06732	778 aa		13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	KLRB1	Q12918	225 aa		13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	CSTF3	Q12996	717 aa	Known RBP	13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	BTBD16	Q32M84	506 aa		13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	PLAG1	Q6DJT9	500 aa		13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	JMJD6	Q6NYC1	403 aa	Predicted RBP	13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	PAGE2	Q7Z2X7	111 aa		13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	GPR180	Q86V85	440 aa		13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	PTRH1	Q86Y79	214 aa	Known RBP	13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	PGM2	Q96G03	612 aa		13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	HBEGF	Q99075	208 aa		13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	WDR77	Q9BQA1	342 aa	Predicted RBP	13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	TRMO	Q9BU70	441 aa		13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	DDX31	Q9H8H2	851 aa	Known RBP	13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	SSU72	Q9NP77	194 aa	Known RBP	13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	NECTIN3	Q9NQS3	549 aa		13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	ANAPC2	Q9UJX6	822 aa		13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	FBXW2	Q9UKT8	454 aa		13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	TLN1	Q9Y490	2541 aa	Known RBP	13.61	□□□□□ -0.23
RANBP1-211	ENST00000448394	ARHGAP10	A1A4S6	786 aa		13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	GOLGA6L10	A6NI86	522 aa		13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	EED	O75530	441 aa	Known RBP	13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	CREB1	P16220	341 aa		13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	ALDH3A1	P30838	453 aa		13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	TLX1	P31314	330 aa	Predicted RBP	13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	BUD31	P41223	144 aa	Predicted RBP	13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	HNRNPF	P52597	415 aa	Known RBP	13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	CRB2	Q5IJ48	1285 aa		13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	CLNK	Q7Z7G1	428 aa		13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	GBP7	Q8N8V2	638 aa	Predicted RBP	13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	TEX19	Q8NA77	164 aa		13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	TMEM52	Q8NDY8	209 aa		13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	C7orf57	Q8NEG2	295 aa		13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	BRIX1	Q8TDN6	353 aa	Known RBP	13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	SMG1	Q96Q15	3661 aa	Known RBP	13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	KCNA7	Q96RP8	456 aa		13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	MRPL1	Q9BYD6	325 aa	Known RBP	13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	EPS8L2	Q9H6S3	715 aa		13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	WDR41	Q9HAD4	459 aa		13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	ADAM29	Q9UKF5	820 aa		13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	ACTL7B	Q9Y614	415 aa		13.6	□□□□□ -0.23
RANBP1-211	ENST00000448394	SCN2A	Q99250	2005 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	SPTA1	P02549	2419 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	SAGE2P	A6NJ88	616 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	UBFD1	O14562	309 aa	Known RBP	13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	CTIF	O43310	598 aa	Known RBP	13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	KALRN	O60229	2985 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	TMPRSS11D	O60235	418 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	CTNS	O60931	367 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	CELA2A	P08217	269 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	FAM58BP	P0C7Q3	252 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	NR2F6	P10588	404 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	ITGAM	P11215	1152 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	PPP2R1B	P30154	601 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	HTR6	P50406	440 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	HNRNPH2	P55795	449 aa	Known RBP	13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	SLC26A5	P58743	744 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	STX4	Q12846	297 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	TERF2	Q15554	542 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	TNFAIP8L3	Q5GJ75	292 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	IGFL3	Q6UXB1	125 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	ISLR2	Q6UXK2	745 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	PRICKLE2	Q7Z3G6	844 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	COMMD6	Q7Z4G1	85 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	EXOC3L1	Q86VI1	746 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	METTL4	Q8N3J2	472 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	M1AP	Q8TC57	530 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	CNDP1	Q96KN2	507 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	MECR	Q9BV79	373 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	GATA5	Q9BWX5	397 aa	Predicted RBP	13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	RPF2	Q9H7B2	306 aa	Known RBP	13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	MMP25	Q9NPA2	562 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	ADAP2	Q9NPF8	381 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	VPS29	Q9UBQ0	182 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	ATG4B	Q9Y4P1	393 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	TIMM22	Q9Y584	194 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	BOD1L1	Q8NFC6	3051 aa		13.59	□□□□□ -0.23
RANBP1-211	ENST00000448394	TM9SF1	O15321	606 aa		13.58	□□□□□ -0.24
RANBP1-211	ENST00000448394	NPHS1	O60500	1241 aa		13.58	□□□□□ -0.24
RANBP1-211	ENST00000448394	GBA	P04062	536 aa		13.58	□□□□□ -0.24
RANBP1-211	ENST00000448394	KLK1	P06870	262 aa		13.58	□□□□□ -0.24
RANBP1-211	ENST00000448394	FOXA1	P55317	472 aa		13.58	□□□□□ -0.24
RANBP1-211	ENST00000448394	TAS2R50	P59544	299 aa		13.58	□□□□□ -0.24
RANBP1-211	ENST00000448394	TBL3	Q12788	808 aa	Known RBP	13.58	□□□□□ -0.24
RANBP1-211	ENST00000448394	MFAP5	Q13361	173 aa		13.58	□□□□□ -0.24
RANBP1-211	ENST00000448394	SERTAD2	Q14140	314 aa		13.58	□□□□□ -0.24
RANBP1-211	ENST00000448394	CASP8	Q14790	479 aa		13.58	□□□□□ -0.24
RANBP1-211	ENST00000448394	ELAVL1	Q15717	326 aa	Known RBP	13.58	□□□□□ -0.24
RANBP1-211	ENST00000448394	CCNYL2	Q5T2Q4	361 aa		13.58	□□□□□ -0.24
RANBP1-211	ENST00000448394	FAM219B	Q5XKK7	198 aa		13.58	□□□□□ -0.24
RANBP1-211	ENST00000448394	MRM1	Q6IN84	353 aa	Known RBP	13.58	□□□□□ -0.24
RANBP1-211	ENST00000448394	HOMEZ	Q8IX15	550 aa		13.58	□□□□□ -0.24
RANBP1-211	ENST00000448394	ZADH2	Q8N4Q0	377 aa		13.58	□□□□□ -0.24
RANBP1-211	ENST00000448394	SIRT6	Q8N6T7	355 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms