RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 CCDC88CQ9P219 2028 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 SLC5A10A0PJK1 596 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 TPST2O60704 377 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 ENTPD6O75354 484 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 BCHEP06276 602 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 SOX3P41225 446 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 CCR2P41597 374 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 PIK3CBP42338 1070 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 CRISP1P54107 249 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 MXD1Q05195 221 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 TMEM215Q68D42 235 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 FRMPD2BQ6IN97 320 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 KLHL17Q6TDP4 642 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 GDPD3Q7L5L3 318 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 HMGN2P46Q86SG4 172 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 DTX3Q8N9I9 347 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 LMLNQ96KR4 655 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 NRTNQ99748 197 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 SLC6A16Q9GZN6 736 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 DMRT3Q9NQL9 472 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 DKK3Q9UBP4 350 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 ENPP4Q9Y6X5 453 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 MKI67P46013 3256 aaKnown RBP12.32□□□□□ -0.44
SHC1-210ENST00000448116 TRBV4-1A0A0J9YWV2 114 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 PNMA8CA0A1B0GUJ8 204 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 PLK4O00444 970 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 ARHGAP33O14559 1287 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 NPC1O15118 1278 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 DPM1O60762 260 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 C1orf105O95561 183 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 DSTNP60981 165 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 DEFB103AP81534 67 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 SF3B4Q15427 424 aaKnown RBP eCLIP12.32□□□□□ -0.444e-10■■■□□ 16.5
SHC1-210ENST00000448116 SPDYE7PQ495Y7 208 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 TUBA3EQ6PEY2 450 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 LILRB1Q8NHL6 650 aaPredicted RBP12.32□□□□□ -0.44
SHC1-210ENST00000448116 CRELD1Q96HD1 420 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 CLEC2DQ9UHP7 191 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 WNT6Q9Y6F9 365 aa12.32□□□□□ -0.44
SHC1-210ENST00000448116 EFCAB10A6NFE3 127 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 PDZK1P1A8MUH7 402 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 HAT1O14929 419 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 KRT75O95678 551 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 CTSLP07711 333 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 GABRB1P18505 474 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 XCR1P46094 333 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 C21orf58P58505 322 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 RBBP4Q09028 425 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 FCHO2Q0JRZ9 810 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 ZNF630Q2M218 657 aaPredicted RBP12.31□□□□□ -0.44
SHC1-210ENST00000448116 ALKBH2Q6NS38 261 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 ADIPOR2Q86V24 386 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 TMC8Q8IU68 726 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 GPR65Q8IYL9 337 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 CELF5Q8N6W0 485 aaKnown RBP12.31□□□□□ -0.44
SHC1-210ENST00000448116 IRF7Q92985 503 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 DEFB118Q96PH6 123 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 SNTG1Q9NSN8 517 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 SCN8AQ9UQD0 1980 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 WWP2O00308 870 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 QSOX1O00391 747 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 CCRL2O00421 344 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 CCNKO75909 580 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 TNNI3P19429 210 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 PTX3P26022 381 aaPredicted RBP12.31□□□□□ -0.44
SHC1-210ENST00000448116 CDC20Q12834 499 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 CAMKMTQ7Z624 323 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 K7ESM1 405 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 GPX5O75715 221 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 PRLHRP49683 370 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 METAP1P53582 386 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 MANFP55145 182 aaKnown RBP12.31□□□□□ -0.44
SHC1-210ENST00000448116 COPZ1P61923 177 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 HSPB3Q12988 150 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 LIPIQ6XZB0 460 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 RBM45Q8IUH3 476 aaKnown RBP12.31□□□□□ -0.44
SHC1-210ENST00000448116 FAM20CQ8IXL6 584 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 METTL2AQ96IZ6 378 aaKnown RBP12.31□□□□□ -0.44
SHC1-210ENST00000448116 EFCAB11Q9BUY7 163 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 ASPNQ9BXN1 380 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 CXorf36Q9H7Y0 433 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 CTPS2Q9NRF8 586 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 DDX28Q9NUL7 540 aaKnown RBP12.31□□□□□ -0.44
SHC1-210ENST00000448116 FKBP14Q9NWM8 211 aa12.31□□□□□ -0.44
SHC1-210ENST00000448116 A0A0G2JN53 185 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 TLR4O00206 839 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 KMOO15229 486 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 MSL3P1P0C860 447 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 TLE2Q04725 743 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 PRKCDQ05655 676 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 DOC2BQ14184 412 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 TEAD2Q15562 447 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 LRIT3Q3SXY7 679 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 TIMM50Q3ZCQ8 353 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 MLIPQ5VWP3 458 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 PLAG1Q6DJT9 500 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 RAET1GQ6H3X3 334 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 ZNF367Q7RTV3 350 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 KREMEN2Q8NCW0 462 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 SLC5A11Q8WWX8 675 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms