RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 SCELO95171 688 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 KLHL2O95198 593 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 IFNA16P05015 189 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 EPB42P16452 691 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 HIST1H1TP22492 207 aaPredicted RBP19.31■□□□□ 0.68
SDC1-205ENST00000447124 ID2Q02363 134 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 NAA30Q147X3 362 aaPredicted RBP19.31■□□□□ 0.68
SDC1-205ENST00000447124 SETDB1Q15047 1291 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 ACAP2Q15057 778 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 ELAVL1Q15717 326 aaKnown RBP19.31■□□□□ 0.68
SDC1-205ENST00000447124 UAP1Q16222 522 aaPredicted RBP19.31■□□□□ 0.68
SDC1-205ENST00000447124 PFKFB4Q16877 469 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 WHAMMP3Q1A5X7 153 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 FAM83EQ2M2I3 478 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 TMEM35AQ53FP2 167 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 GRHL2Q6ISB3 625 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 Q6ZPB1 254 aaPredicted RBP19.31■□□□□ 0.68
SDC1-205ENST00000447124 MDGA2Q7Z553 956 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 SPPL2CQ8IUH8 684 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 RELL1Q8IUW5 271 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 TMEM132CQ8N3T6 1108 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 NOA1Q8NC60 698 aaKnown RBP19.31■□□□□ 0.68
SDC1-205ENST00000447124 FAM98AQ8NCA5 519 aaKnown RBP19.31■□□□□ 0.68
SDC1-205ENST00000447124 SREK1Q8WXA9 508 aaKnown RBP19.31■□□□□ 0.68
SDC1-205ENST00000447124 CMTM7Q96FZ5 175 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 FUT8Q9BYC5 575 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 ROGDIQ9GZN7 287 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 ACSS3Q9H6R3 686 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 ZNF358Q9NW07 568 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 TINAGQ9UJW2 476 aa19.31■□□□□ 0.68
SDC1-205ENST00000447124 SYCE1LA8MT33 242 aa19.3■□□□□ 0.68
SDC1-205ENST00000447124 GRNP28799 593 aaKnown RBP19.3■□□□□ 0.68
SDC1-205ENST00000447124 TYK2P29597 1187 aa19.3■□□□□ 0.68
SDC1-205ENST00000447124 HSF1Q00613 529 aa19.3■□□□□ 0.68
SDC1-205ENST00000447124 RCN2Q14257 317 aa19.3■□□□□ 0.68
SDC1-205ENST00000447124 AP5B1Q2VPB7 878 aa19.3■□□□□ 0.68
SDC1-205ENST00000447124 KHDRBS2Q5VWX1 349 aaKnown RBP19.3■□□□□ 0.68
SDC1-205ENST00000447124 OR4C11Q6IEV9 310 aa19.3■□□□□ 0.68
SDC1-205ENST00000447124 CHSY3Q70JA7 882 aa19.3■□□□□ 0.68
SDC1-205ENST00000447124 CCDC91Q7Z6B0 441 aa19.3■□□□□ 0.68
SDC1-205ENST00000447124 FGD2Q7Z6J4 655 aa19.3■□□□□ 0.68
SDC1-205ENST00000447124 MRGPRGQ86SM5 289 aa19.3■□□□□ 0.68
SDC1-205ENST00000447124 HUS1BQ8NHY5 278 aa19.3■□□□□ 0.68
SDC1-205ENST00000447124 YARS2Q9Y2Z4 477 aaKnown RBP19.3■□□□□ 0.68
SDC1-205ENST00000447124 SIX3O95343 332 aaPredicted RBP19.29■□□□□ 0.68
SDC1-205ENST00000447124 RFC3P40938 356 aa19.29■□□□□ 0.68
SDC1-205ENST00000447124 MEOX1P50221 254 aa19.29■□□□□ 0.68
SDC1-205ENST00000447124 ALDH18A1P54886 795 aaKnown RBP19.29■□□□□ 0.68
SDC1-205ENST00000447124 ADORA2A-AS1P86434 159 aa19.29■□□□□ 0.68
SDC1-205ENST00000447124 STX4Q12846 297 aa19.29■□□□□ 0.68
SDC1-205ENST00000447124 SLAMF1Q13291 335 aa19.29■□□□□ 0.68
SDC1-205ENST00000447124 ART3Q13508 389 aa19.29■□□□□ 0.68
SDC1-205ENST00000447124 DDX39BQ13838 428 aaKnown RBP19.29■□□□□ 0.68
SDC1-205ENST00000447124 PCBP2Q15366 365 aaKnown RBP eCLIP19.29■□□□□ 0.68
SDC1-205ENST00000447124 OR4N5Q8IXE1 308 aa19.29■□□□□ 0.68
SDC1-205ENST00000447124 TMEM156Q8N614 296 aa19.29■□□□□ 0.68
SDC1-205ENST00000447124 MORN4Q8NDC4 146 aa19.29■□□□□ 0.68
SDC1-205ENST00000447124 TMEM125Q96AQ2 219 aa19.29■□□□□ 0.68
SDC1-205ENST00000447124 MTERF1Q99551 399 aaKnown RBP19.29■□□□□ 0.68
SDC1-205ENST00000447124 VPS11Q9H270 941 aa19.29■□□□□ 0.68
SDC1-205ENST00000447124 CDC42EP4Q9H3Q1 356 aaKnown RBP19.29■□□□□ 0.68
SDC1-205ENST00000447124 SUCOQ9UBS9 1254 aaKnown RBP19.29■□□□□ 0.68
SDC1-205ENST00000447124 TSC22D4Q9Y3Q8 395 aa19.29■□□□□ 0.68
SDC1-205ENST00000447124 CLCA3PQ9Y6N3 262 aa19.29■□□□□ 0.68
SDC1-205ENST00000447124 CCDC189A1A4V9 331 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 PRSS44E7EML9 344 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 PEX1O43933 1283 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 ZNF354AO60765 605 aaPredicted RBP19.28■□□□□ 0.68
SDC1-205ENST00000447124 OR2J2O76002 312 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 ETHE1O95571 254 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 GFAPP14136 432 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 TNNI3P19429 210 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 CPN2P22792 545 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 ECHS1P30084 290 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 SERPINB1P30740 379 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 PHBP35232 272 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 PIK3CBP42338 1070 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 SSR4P51571 173 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 RPS13P62277 151 aaKnown RBP19.28■□□□□ 0.68
SDC1-205ENST00000447124 LIPJQ5W064 366 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 GOLGA7Q7Z5G4 137 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 LURAP1LQ8IV03 231 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 SLC34A3Q8N130 599 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 CYP4Z2PQ8N1L4 340 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 SLC44A1Q8WWI5 657 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 DAZLQ92904 295 aaKnown RBP19.28■□□□□ 0.68
SDC1-205ENST00000447124 CCDC77Q9BR77 488 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 ZNF717Q9BY31 904 aaPredicted RBP19.28■□□□□ 0.68
SDC1-205ENST00000447124 OR8D2Q9GZM6 311 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 PRM3Q9NNZ6 103 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 DMRT3Q9NQL9 472 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 DEPPQ9NTK1 212 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 MYOTQ9UBF9 498 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 ADGRE2Q9UHX3 823 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 ENTPD4Q9Y227 616 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 KLF13Q9Y2Y9 288 aaPredicted RBP19.28■□□□□ 0.68
SDC1-205ENST00000447124 RNF11Q9Y3C5 154 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 ANGPTL3Q9Y5C1 460 aa19.28■□□□□ 0.68
SDC1-205ENST00000447124 WASHC1A8K0Z3 465 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 C17orf105B2RV13 164 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms