RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 EFTUD2Q15029 972 aaKnown RBP eCLIP22.57■■□□□ 1.2
PMS1-214ENST00000446877 KRT78Q8N1N4 520 aa22.57■■□□□ 1.2
PMS1-214ENST00000446877 CERS2Q96G23 380 aa22.57■■□□□ 1.2
PMS1-214ENST00000446877 PWWP2AQ96N64 755 aa22.57■■□□□ 1.2
PMS1-214ENST00000446877 GPATCH1Q9BRR8 931 aaKnown RBP22.57■■□□□ 1.2
PMS1-214ENST00000446877 OR8D2Q9GZM6 311 aa22.57■■□□□ 1.2
PMS1-214ENST00000446877 ZNF358Q9NW07 568 aa22.57■■□□□ 1.2
PMS1-214ENST00000446877 DNAJC13O75165 2243 aa22.57■■□□□ 1.2
PMS1-214ENST00000446877 GABRA1P14867 456 aa22.56■■□□□ 1.2
PMS1-214ENST00000446877 ADH7P40394 386 aa22.56■■□□□ 1.2
PMS1-214ENST00000446877 PPP1R3AQ16821 1122 aa22.56■■□□□ 1.2
PMS1-214ENST00000446877 TEDDM1Q5T9Z0 273 aa22.56■■□□□ 1.2
PMS1-214ENST00000446877 TRIM40Q6P9F5 258 aa22.56■■□□□ 1.2
PMS1-214ENST00000446877 GRK7Q8WTQ7 553 aa22.56■■□□□ 1.2
PMS1-214ENST00000446877 MS4A14Q96JA4 679 aa22.56■■□□□ 1.2
PMS1-214ENST00000446877 SERINC2Q96SA4 455 aa22.56■■□□□ 1.2
PMS1-214ENST00000446877 NAP1L3Q99457 506 aaPredicted RBP22.56■■□□□ 1.2
PMS1-214ENST00000446877 ALOXE3Q9BYJ1 711 aa22.56■■□□□ 1.2
PMS1-214ENST00000446877 REXO4Q9GZR2 422 aaKnown RBP22.56■■□□□ 1.2
PMS1-214ENST00000446877 LIME1Q9H400 295 aa22.56■■□□□ 1.2
PMS1-214ENST00000446877 COPS7BQ9H9Q2 264 aaPredicted RBP22.56■■□□□ 1.2
PMS1-214ENST00000446877 RASSF1Q9NS23 344 aa22.56■■□□□ 1.2
PMS1-214ENST00000446877 SLC17A6Q9P2U8 582 aa22.56■■□□□ 1.2
PMS1-214ENST00000446877 B4GALT7Q9UBV7 327 aa22.56■■□□□ 1.2
PMS1-214ENST00000446877 VTI1BQ9UEU0 232 aa22.56■■□□□ 1.2
PMS1-214ENST00000446877 IKZF3Q9UKT9 509 aa22.56■■□□□ 1.2
PMS1-214ENST00000446877 TRGV5A0A0B4J1U4 118 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 ANKDD1BA6NHY2 528 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 WDR47O94967 919 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 CELA3AP09093 270 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 DRD2P14416 443 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 UQCRC1P31930 480 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 DNASE1L1P49184 302 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 DGKQP52824 942 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 MTTPP55157 894 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 RNF4P78317 190 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 FOXD4Q12950 439 aaPredicted RBP22.55■■□□□ 1.2
PMS1-214ENST00000446877 SLBPQ14493 270 aaKnown RBP eCLIP22.55■■□□□ 1.2
PMS1-214ENST00000446877 CYP1B1Q16678 543 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 HYAL4Q2M3T9 481 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 SLCO4C1Q6ZQN7 724 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 MMP21Q8N119 569 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 OR2L5Q8NG80 312 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 OR8K3Q8NH51 312 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 PTPMT1Q8WUK0 201 aaPredicted RBP22.55■■□□□ 1.2
PMS1-214ENST00000446877 KIAA1191Q96A73 305 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 LRRC46Q96FV0 321 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 QRFPRQ96P65 431 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 PLEKHA6Q9Y2H5 1048 aa22.55■■□□□ 1.2
PMS1-214ENST00000446877 MYOCOSA0A1B0GUC4 107 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 CDC7O00311 574 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 CYR61O00622 381 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 HCN1O60741 890 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 CLEC3AO75596 197 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 FOSL1P15407 271 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 LIM2P55344 173 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 CDKL1Q00532 357 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 TGM3Q08188 693 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 FOXO1Q12778 655 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 SNTB1Q13884 538 aaKnown RBP22.54■■□□□ 1.2
PMS1-214ENST00000446877 PPP1R7Q15435 360 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 RIPPLY2Q5TAB7 128 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 RNASEH2BQ5TBB1 312 aaKnown RBP22.54■■□□□ 1.2
PMS1-214ENST00000446877 FRA10AC1Q70Z53 315 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 RASGEF1CQ8N431 466 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 NKAPQ8N5F7 415 aaKnown RBP22.54■■□□□ 1.2
PMS1-214ENST00000446877 ANKRD7Q92527 254 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 PBKQ96KB5 322 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 CNPPD1Q9BV87 410 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 CAPS2Q9BXY5 557 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 TUBA8Q9NY65 449 aaPredicted RBP22.54■■□□□ 1.2
PMS1-214ENST00000446877 CRIM1Q9NZV1 1036 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 COPS7AQ9UBW8 275 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 DAPP1Q9UN19 280 aa22.54■■□□□ 1.2
PMS1-214ENST00000446877 PHF3Q92576 2039 aaKnown RBP22.53■■□□□ 1.2
PMS1-214ENST00000446877 NPEPPSL1A6NEC2 478 aa22.53■■□□□ 1.2
PMS1-214ENST00000446877 C17orf105B2RV13 164 aa22.53■■□□□ 1.2
PMS1-214ENST00000446877 SYT5O00445 386 aa22.53■■□□□ 1.2
PMS1-214ENST00000446877 PROM1O43490 865 aa22.53■■□□□ 1.2
PMS1-214ENST00000446877 BANF1O75531 89 aa22.53■■□□□ 1.2
PMS1-214ENST00000446877 SERTAD2Q14140 314 aa22.53■■□□□ 1.2
PMS1-214ENST00000446877 SLCO2A1Q92959 643 aa22.53■■□□□ 1.2
PMS1-214ENST00000446877 ALPK1Q96QP1 1244 aa22.53■■□□□ 1.2
PMS1-214ENST00000446877 CSF3RQ99062 836 aa22.53■■□□□ 1.2
PMS1-214ENST00000446877 PITHD1Q9GZP4 211 aaPredicted RBP22.53■■□□□ 1.2
PMS1-214ENST00000446877 NT5DC2Q9H857 520 aa22.53■■□□□ 1.2
PMS1-214ENST00000446877 ATG4BQ9Y4P1 393 aa22.53■■□□□ 1.2
PMS1-214ENST00000446877 OARD1Q9Y530 152 aa22.53■■□□□ 1.2
PMS1-214ENST00000446877 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.53■■□□□ 1.2
PMS1-214ENST00000446877 HSPB2A8KAH6 182 aa22.52■■□□□ 1.2
PMS1-214ENST00000446877 CCL3P10147 92 aa22.52■■□□□ 1.2
PMS1-214ENST00000446877 ZNF37AP17032 561 aaPredicted RBP22.52■■□□□ 1.2
PMS1-214ENST00000446877 CERS1P27544 350 aa22.52■■□□□ 1.2
PMS1-214ENST00000446877 GDF5P43026 501 aa22.52■■□□□ 1.2
PMS1-214ENST00000446877 HSPB2Q16082 182 aa22.52■■□□□ 1.2
PMS1-214ENST00000446877 ABHD17CQ6PCB6 329 aa22.52■■□□□ 1.2
PMS1-214ENST00000446877 ZNF321PQ8N8H1 164 aa22.52■■□□□ 1.2
PMS1-214ENST00000446877 SLC2A12Q8TD20 617 aa22.52■■□□□ 1.2
PMS1-214ENST00000446877 RUNDC3BQ96NL0 473 aa22.52■■□□□ 1.2
PMS1-214ENST00000446877 GSX1Q9H4S2 264 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms