RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 CUL3Q13618 768 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 EXT1Q16394 746 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 CCDC153Q494R4 210 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 C18orf63Q68DL7 685 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 GPRIN3Q6ZVF9 776 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 CUZD1Q86UP6 607 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 SRRM1Q8IYB3 904 aaKnown RBP13.89□□□□□ -0.19
HDAC4-204ENST00000446876 ZNF595Q8IYB9 648 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 RIBC1Q8N443 379 aaPredicted RBP13.89□□□□□ -0.19
HDAC4-204ENST00000446876 CATSPER1Q8NEC5 780 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 ARMC2Q8NEN0 867 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 SELENOMQ8WWX9 145 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 APOPT1Q96IL0 206 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 KCNA7Q96RP8 456 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 ZNF382Q96SR6 550 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 MRPL1Q9BYD6 325 aaKnown RBP13.89□□□□□ -0.19
HDAC4-204ENST00000446876 ILKAPQ9H0C8 392 aaPredicted RBP13.89□□□□□ -0.19
HDAC4-204ENST00000446876 ELOVL6Q9H5J4 265 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 SLAMF7Q9NQ25 335 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 GRID1Q9ULK0 1009 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 B3GNT3Q9Y2A9 372 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 SHANK1Q9Y566 2161 aa13.89□□□□□ -0.19
HDAC4-204ENST00000446876 A0A0A6YYD5 115 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 CLDN4O14493 209 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 SPAG7O75391 227 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 MYO1DO94832 1006 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 CREB1P16220 341 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 HTR6P50406 440 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 LCP2Q13094 533 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 Q6ZS92 163 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 OR4N5Q8IXE1 308 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 ZCCHC7Q8N3Z6 543 aaKnown RBP13.88□□□□□ -0.19
HDAC4-204ENST00000446876 BANPQ8N9N5 519 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 NFAM1Q8NET5 270 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-204ENST00000446876 DNAJB14Q8TBM8 379 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 M1APQ8TC57 530 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 LMF1Q96S06 567 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 SERPINI1Q99574 410 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 NPAS2Q99743 824 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 ROPN1BQ9BZX4 212 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-204ENST00000446876 ROPN1Q9HAT0 212 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-204ENST00000446876 MMP25Q9NPA2 562 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 PPT2Q9UMR5 302 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 SLC12A4Q9UP95 1085 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 ATG4BQ9Y4P1 393 aa13.88□□□□□ -0.19
HDAC4-204ENST00000446876 ARHGAP10A1A4S6 786 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 WASHC1A8K0Z3 465 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 MANBAO00462 879 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 UBFD1O14562 309 aaKnown RBP13.87□□□□□ -0.19
HDAC4-204ENST00000446876 FGF17O60258 216 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 CTNSO60931 367 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 SEMA3DO95025 777 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 WDPCPO95876 746 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 CPA3P15088 417 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 CHN1P15882 459 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 TSFMP43897 325 aaKnown RBP13.87□□□□□ -0.19
HDAC4-204ENST00000446876 NAGLUP54802 743 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 AP2B1P63010 937 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 ARG2P78540 354 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 TNFRSF17Q02223 184 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 ZNF844Q08AG5 666 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 RCN2Q14257 317 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 PCLAFQ15004 111 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 KRT71Q3SY84 523 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 ABHD17BQ5VST6 288 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 MRM1Q6IN84 353 aaKnown RBP13.87□□□□□ -0.19
HDAC4-204ENST00000446876 CYP20A1Q6UW02 462 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 GPR180Q86V85 440 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 NUDT13Q86X67 352 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 CRLF3Q8IUI8 442 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 BEST3Q8N1M1 668 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 CPT1CQ8TCG5 803 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 AGAP11Q8TF27 550 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 SREK1Q8WXA9 508 aaKnown RBP13.87□□□□□ -0.19
HDAC4-204ENST00000446876 UCN3Q969E3 161 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 ANKRD9Q96BM1 317 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-204ENST00000446876 DDX31Q9H8H2 851 aaKnown RBP13.87□□□□□ -0.19
HDAC4-204ENST00000446876 MID1IP1Q9NPA3 183 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 PSD3Q9NYI0 1048 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 MAP10Q9P2G4 905 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 SLC17A7Q9P2U7 560 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 SNX6Q9UNH7 406 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 ASB4Q9Y574 426 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 TIMM22Q9Y584 194 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 SPACA6W5XKT8 324 aa13.87□□□□□ -0.19
HDAC4-204ENST00000446876 GCN1Q92616 2671 aaKnown RBP13.87□□□□□ -0.19
HDAC4-204ENST00000446876 NBASA2RRP1 2371 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 A0A1W2PR48 441 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 GLOD5A6NK44 160 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 MLYCDO95822 493 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 AIFM1O95831 613 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 IFNA16P05015 189 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 KLK1P06870 262 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 FAM58BPP0C7Q3 252 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 TPP2P29144 1249 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-204ENST00000446876 HMOX2P30519 316 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 ARFIP1P53367 373 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 FOXA1P55317 472 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 FOXK1P85037 733 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 STX4Q12846 297 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms