RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 AGFG2O95081 481 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 SCELO95171 688 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 ETHE1O95571 254 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 SHBGP04278 402 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 CPN2P22792 545 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 CDH13P55290 713 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 PHEXP78562 749 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 OC90Q02509 493 aaPredicted RBP13.78□□□□□ -0.2
USE1-202ENST00000445667 TRAF3Q13114 568 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 ELOAQ14241 798 aaKnown RBP13.78□□□□□ -0.2
USE1-202ENST00000445667 ZNF766Q5HY98 468 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 ZNF468Q5VIY5 522 aaPredicted RBP13.78□□□□□ -0.2
USE1-202ENST00000445667 FAM219BQ5XKK7 198 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 SPINK14Q6IE38 97 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 MILR1Q7Z6M3 343 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 OR4N5Q8IXE1 308 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 BCORP1Q8N888 145 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 B3GNT7Q8NFL0 401 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 UBLCP1Q8WVY7 318 aaPredicted RBP13.78□□□□□ -0.2
USE1-202ENST00000445667 NCLNQ969V3 563 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 REPS1Q96D71 796 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 CENPKQ9BS16 269 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 NTMT1Q9BV86 223 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 HES7Q9BYE0 225 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 DEFB126Q9BYW3 111 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 KLHL1Q9NR64 748 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 OLAHQ9NV23 265 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 PSMC3IPQ9P2W1 217 aaPredicted RBP13.78□□□□□ -0.2
USE1-202ENST00000445667 ZNF223Q9UK11 482 aaPredicted RBP13.78□□□□□ -0.2
USE1-202ENST00000445667 A0A1W2PPM1 405 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 EEDO75530 441 aaKnown RBP13.77□□□□□ -0.21
USE1-202ENST00000445667 RASAL1O95294 804 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 RPS17P08708 135 aaKnown RBP13.77□□□□□ -0.21
USE1-202ENST00000445667 PYGBP11216 843 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 TPP2P29144 1249 aaPredicted RBP13.77□□□□□ -0.21
USE1-202ENST00000445667 CLCN2P51788 898 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 GPR143P51810 404 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 HNRNPH2P55795 449 aaKnown RBP13.77□□□□□ -0.21
USE1-202ENST00000445667 MLF1P58340 268 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 PMP22Q01453 160 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 STX4Q12846 297 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 FLNCQ14315 2725 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 OR1C1Q15619 314 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 SGO1Q5FBB7 561 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 C18orf63Q68DL7 685 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 ZNF324BQ6AW86 544 aaPredicted RBP13.77□□□□□ -0.21
USE1-202ENST00000445667 TTC19Q6DKK2 380 aaPredicted RBP13.77□□□□□ -0.21
USE1-202ENST00000445667 EIF1ADQ8N9N8 165 aaKnown RBP13.77□□□□□ -0.21
USE1-202ENST00000445667 ST6GALNAC3Q8NDV1 305 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 MDS2Q8NDY4 140 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 OR4F6Q8NGB9 312 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 ZNF483Q8TF39 744 aaPredicted RBP13.77□□□□□ -0.21
USE1-202ENST00000445667 MZB1Q8WU39 189 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 SREK1Q8WXA9 508 aaKnown RBP13.77□□□□□ -0.21
USE1-202ENST00000445667 ANKRD9Q96BM1 317 aaPredicted RBP13.77□□□□□ -0.21
USE1-202ENST00000445667 CCDC77Q9BR77 488 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 ZNF717Q9BY31 904 aaPredicted RBP13.77□□□□□ -0.21
USE1-202ENST00000445667 LIN28AQ9H9Z2 209 aaKnown RBP13.77□□□□□ -0.21
USE1-202ENST00000445667 ADAP2Q9NPF8 381 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 FETUBQ9UGM5 382 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 ATG4BQ9Y4P1 393 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 SPACA6W5XKT8 324 aa13.77□□□□□ -0.21
USE1-202ENST00000445667 BLACEA4D250 179 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 WASHC1A8K0Z3 465 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 FOXE1O00358 373 aaPredicted RBP13.76□□□□□ -0.21
USE1-202ENST00000445667 PRKNO60260 465 aaPredicted RBP13.76□□□□□ -0.21
USE1-202ENST00000445667 DLX3O60479 287 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 PRKRAO75569 313 aaKnown RBP13.76□□□□□ -0.21
USE1-202ENST00000445667 WISP2O76076 250 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 EDN3P14138 238 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 TNNI3P19429 210 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 TAC1P20366 129 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 BSGP35613 385 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 SLCO1A2P46721 670 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 CUL3Q13618 768 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 TERF2Q15554 542 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 ELAVL1Q15717 326 aaKnown RBP13.76□□□□□ -0.21
USE1-202ENST00000445667 FRG2Q64ET8 278 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 GPR180Q86V85 440 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 LGI4Q8N135 537 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 TMEM132CQ8N3T6 1108 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 ZCCHC7Q8N3Z6 543 aaKnown RBP13.76□□□□□ -0.21
USE1-202ENST00000445667 TRPC4APQ8TEL6 797 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 PTPMT1Q8WUK0 201 aaPredicted RBP13.76□□□□□ -0.21
USE1-202ENST00000445667 VMP1Q96GC9 406 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 FRG2BQ96QU4 278 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 SLX1AQ9BQ83 275 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 RPF2Q9H7B2 306 aaKnown RBP13.76□□□□□ -0.21
USE1-202ENST00000445667 ANKZF1Q9H8Y5 726 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 FARSBQ9NSD9 589 aaKnown RBP13.76□□□□□ -0.21
USE1-202ENST00000445667 PSD3Q9NYI0 1048 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 LRFN1Q9P244 771 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 VTI1BQ9UEU0 232 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 PPIEQ9UNP9 301 aaKnown RBP13.76□□□□□ -0.21
USE1-202ENST00000445667 CLCA3PQ9Y6N3 262 aa13.76□□□□□ -0.21
USE1-202ENST00000445667 ASH1LQ9NR48 2969 aaKnown RBP13.76□□□□□ -0.21
USE1-202ENST00000445667 SMIM23A6NLE4 172 aa13.75□□□□□ -0.21
USE1-202ENST00000445667 TMPRSS11DO60235 418 aa13.75□□□□□ -0.21
USE1-202ENST00000445667 FGF17O60258 216 aa13.75□□□□□ -0.21
USE1-202ENST00000445667 NEURL1O76050 574 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms