RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 UHMK1Q8TAS1 419 aaKnown RBP17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 WDR20Q8TBZ3 569 aa17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 VMP1Q96GC9 406 aa17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 SCMH1Q96GD3 660 aa17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 CSF3RQ99062 836 aa17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 NTMT1Q9BV86 223 aa17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 OR51B5Q9H339 312 aa17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 LRRC14BA6NHZ5 514 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 A8MUA0 341 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 RTCAO00442 366 aaKnown RBP17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 NEURL1O76050 574 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 RHOXF2BP0C7M4 288 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 GP1BBP13224 206 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 GCAP28676 217 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 EEF1DP29692 281 aaKnown RBP17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 SSR2P43308 183 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 CYB561P49447 251 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 STX4Q12846 297 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 BIKQ13323 160 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 CPSF6Q16630 551 aaKnown RBP eCLIP17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 TMEM151AQ8N4L1 468 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 TMEM178AQ8NBL3 297 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 DAZLQ92904 295 aaKnown RBP17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 PHF21BQ96EK2 531 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 SCYL1Q96KG9 808 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 SIGLEC12Q96PQ1 595 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 MTERF1Q99551 399 aaKnown RBP17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 MAPKAP1Q9BPZ7 522 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 RHOXF2Q9BQY4 288 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 C1QTNF3Q9BXJ4 246 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 NOL11Q9H8H0 719 aaKnown RBP17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 PRM3Q9NNZ6 103 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 PNO1Q9NRX1 252 aaKnown RBP17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 ERRFI1Q9UJM3 462 aaPredicted RBP17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 PCTPQ9UKL6 214 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 RNF11Q9Y3C5 154 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 CLCA3PQ9Y6N3 262 aa17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 SPTBN1Q01082 2364 aaKnown RBP17.58■□□□□ 0.4
ATPAF2-201ENST00000444058 FCHO1O14526 889 aa17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 OR7A17O14581 309 aa17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 TPP2P29144 1249 aaPredicted RBP17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 RAP1GDS1P52306 607 aa17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 OC90Q02509 493 aaPredicted RBP17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 DDX39BQ13838 428 aaKnown RBP17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 SLC29A2Q14542 456 aa17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 ZRSR2Q15696 482 aaKnown RBP17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 GGTA1PQ4G0N0 100 aa17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 SPINK14Q6IE38 97 aa17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 MORN4Q8NDC4 146 aa17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 OR14A16Q8NHC5 309 aa17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 ATP6V1E2Q96A05 226 aa17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 C5orf34Q96MH7 638 aa17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 ALOXE3Q9BYJ1 711 aa17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 L2HGDHQ9H9P8 463 aa17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 LRFN1Q9P244 771 aa17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 PHF11Q9UIL8 331 aa17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 DOPEY1Q5JWR5 2465 aa17.57■□□□□ 0.4
ATPAF2-201ENST00000444058 TRBV11-1A0A0K0K1C0 115 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 IQANK1A0A1B0GTG1 560 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 ASPDHA6ND91 283 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 SAP18O00422 153 aaKnown RBP17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 PLPP1O14494 284 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 SP1P08047 785 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 RPS17P08708 135 aaKnown RBP17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 FAM153BP0C7A2 387 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 CPN2P22792 545 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 PPP2R1BP30154 601 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 HLCSP50747 726 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 CCNG1P51959 295 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 RPS13P62277 151 aaKnown RBP17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 IGLV3-21P80748 117 aaPredicted RBP17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 SLAMF1Q13291 335 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 FAM153CQ494X1 144 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 SLC25A25Q6KCM7 469 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 CLNKQ7Z7G1 428 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 GPR180Q86V85 440 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 OR52B6Q8NGF0 335 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 ACMSDQ8TDX5 336 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 PTPMT1Q8WUK0 201 aaPredicted RBP17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 TANKQ92844 425 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 NCLNQ969V3 563 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 CCDC77Q9BR77 488 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 ZNF717Q9BY31 904 aaPredicted RBP17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 DDX31Q9H8H2 851 aaKnown RBP17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 ZBTB26Q9HCK0 441 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 ANKRD10Q9NXR5 420 aa17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 ZNF223Q9UK11 482 aaPredicted RBP17.56■□□□□ 0.4
ATPAF2-201ENST00000444058 SH3BGRLO75368 114 aa17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 ZFAND5O76080 213 aa17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 SEMA3DO95025 777 aa17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 MLYCDO95822 493 aa17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 LDLRP01130 860 aa17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 IFNA16P05015 189 aa17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 STSP08842 583 aa17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 SBK3P0C264 359 aa17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 TLX1P31314 330 aaPredicted RBP17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 TRAF3Q13114 568 aa17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 C4orf17Q53FE4 359 aa17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 FRG2Q64ET8 278 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms