RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 ST13P50502 369 aaKnown RBP20.67■□□□□ 0.9
HDLBP-220ENST00000442730 RAP1GDS1P52306 607 aa20.67■□□□□ 0.9
HDLBP-220ENST00000442730 RPS13P62277 151 aaKnown RBP20.67■□□□□ 0.9
HDLBP-220ENST00000442730 VSNL1P62760 191 aa20.67■□□□□ 0.9
HDLBP-220ENST00000442730 SLC29A2Q14542 456 aa20.67■□□□□ 0.9
HDLBP-220ENST00000442730 OR1C1Q15619 314 aa20.67■□□□□ 0.9
HDLBP-220ENST00000442730 RPS19BP1Q86WX3 136 aaKnown RBP20.67■□□□□ 0.9
HDLBP-220ENST00000442730 ARMC10Q8N2F6 343 aa20.67■□□□□ 0.9
HDLBP-220ENST00000442730 WDR20Q8TBZ3 569 aa20.67■□□□□ 0.9
HDLBP-220ENST00000442730 SIGLEC12Q96PQ1 595 aa20.67■□□□□ 0.9
HDLBP-220ENST00000442730 CDK15Q96Q40 435 aa20.67■□□□□ 0.9
HDLBP-220ENST00000442730 ZNF717Q9BY31 904 aaPredicted RBP20.67■□□□□ 0.9
HDLBP-220ENST00000442730 CDCP1Q9H5V8 836 aa20.67■□□□□ 0.9
HDLBP-220ENST00000442730 ZBTB26Q9HCK0 441 aa20.67■□□□□ 0.9
HDLBP-220ENST00000442730 ADAP2Q9NPF8 381 aa20.67■□□□□ 0.9
HDLBP-220ENST00000442730 FETUBQ9UGM5 382 aa20.67■□□□□ 0.9
HDLBP-220ENST00000442730 DOPEY1Q5JWR5 2465 aa20.67■□□□□ 0.9
HDLBP-220ENST00000442730 POLEQ07864 2286 aa20.66■□□□□ 0.9
HDLBP-220ENST00000442730 TRBV11-1A0A0K0K1C0 115 aa20.66■□□□□ 0.9
HDLBP-220ENST00000442730 SYNDIG1LA6NDD5 238 aa20.66■□□□□ 0.9
HDLBP-220ENST00000442730 RPS17P08708 135 aaKnown RBP20.66■□□□□ 0.9
HDLBP-220ENST00000442730 TPP2P29144 1249 aaPredicted RBP20.66■□□□□ 0.9
HDLBP-220ENST00000442730 PHEXP78562 749 aa20.66■□□□□ 0.9
HDLBP-220ENST00000442730 TRAF3Q13114 568 aa20.66■□□□□ 0.9
HDLBP-220ENST00000442730 ELOAQ14241 798 aaKnown RBP20.66■□□□□ 0.9
HDLBP-220ENST00000442730 ZRSR2Q15696 482 aaKnown RBP20.66■□□□□ 0.9
HDLBP-220ENST00000442730 ZNF766Q5HY98 468 aa20.66■□□□□ 0.9
HDLBP-220ENST00000442730 OR4C11Q6IEV9 310 aa20.66■□□□□ 0.9
HDLBP-220ENST00000442730 RGMAQ96B86 450 aa20.66■□□□□ 0.9
HDLBP-220ENST00000442730 CENPKQ9BS16 269 aa20.66■□□□□ 0.9
HDLBP-220ENST00000442730 PSMC3IPQ9P2W1 217 aaPredicted RBP20.66■□□□□ 0.9
HDLBP-220ENST00000442730 ZNF223Q9UK11 482 aaPredicted RBP20.66■□□□□ 0.9
HDLBP-220ENST00000442730 SPACA6W5XKT8 324 aa20.66■□□□□ 0.9
HDLBP-220ENST00000442730 BLACEA4D250 179 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 A8MT66 165 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 ETHE1O95571 254 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 RNF224P0DH78 156 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 PTX3P26022 381 aaPredicted RBP20.65■□□□□ 0.9
HDLBP-220ENST00000442730 ARL1P40616 181 aaPredicted RBP20.65■□□□□ 0.9
HDLBP-220ENST00000442730 GPR143P51810 404 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 TDGF1P3P51864 188 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 NEK2P51955 445 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 CCNG1P51959 295 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 ARFIP1P53367 373 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 MLF1P58340 268 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 ELAVL1Q15717 326 aaKnown RBP20.65■□□□□ 0.9
HDLBP-220ENST00000442730 ZNF468Q5VIY5 522 aaPredicted RBP20.65■□□□□ 0.9
HDLBP-220ENST00000442730 ZCCHC7Q8N3Z6 543 aaKnown RBP20.65■□□□□ 0.9
HDLBP-220ENST00000442730 NR4A3Q92570 626 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 NCLNQ969V3 563 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 ATP6V1E2Q96A05 226 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 VMP1Q96GC9 406 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 SCMH1Q96GD3 660 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 PSMG3-AS1Q96PY0 264 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 NTMT1Q9BV86 223 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 C1QTNF3Q9BXJ4 246 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 HES7Q9BYE0 225 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 DEFB126Q9BYW3 111 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 FBXW2Q9UKT8 454 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 PCDHGB6Q9Y5F9 930 aa20.65■□□□□ 0.9
HDLBP-220ENST00000442730 SPTBN1Q01082 2364 aaKnown RBP20.65■□□□□ 0.9
HDLBP-220ENST00000442730 FOXE1O00358 373 aaPredicted RBP20.64■□□□□ 0.89
HDLBP-220ENST00000442730 LDB3O75112 727 aa20.64■□□□□ 0.89
HDLBP-220ENST00000442730 NEURL1O76050 574 aa20.64■□□□□ 0.89
HDLBP-220ENST00000442730 RASAL1O95294 804 aa20.64■□□□□ 0.89
HDLBP-220ENST00000442730 CPN2P22792 545 aa20.64■□□□□ 0.89
HDLBP-220ENST00000442730 CLCN2P51788 898 aa20.64■□□□□ 0.89
HDLBP-220ENST00000442730 PMP22Q01453 160 aa20.64■□□□□ 0.89
HDLBP-220ENST00000442730 STX4Q12846 297 aa20.64■□□□□ 0.89
HDLBP-220ENST00000442730 CUL3Q13618 768 aa20.64■□□□□ 0.89
HDLBP-220ENST00000442730 SPINK14Q6IE38 97 aa20.64■□□□□ 0.89
HDLBP-220ENST00000442730 RPS27LQ71UM5 84 aaKnown RBP20.64■□□□□ 0.89
HDLBP-220ENST00000442730 LCA5Q86VQ0 697 aa20.64■□□□□ 0.89
HDLBP-220ENST00000442730 ZNF483Q8TF39 744 aaPredicted RBP20.64■□□□□ 0.89
HDLBP-220ENST00000442730 MZB1Q8WU39 189 aa20.64■□□□□ 0.89
HDLBP-220ENST00000442730 UBLCP1Q8WVY7 318 aaPredicted RBP20.64■□□□□ 0.89
HDLBP-220ENST00000442730 SEMA4BQ9NPR2 832 aaPredicted RBP20.64■□□□□ 0.89
HDLBP-220ENST00000442730 ERRFI1Q9UJM3 462 aaPredicted RBP20.64■□□□□ 0.89
HDLBP-220ENST00000442730 PPT2Q9UMR5 302 aa20.64■□□□□ 0.89
HDLBP-220ENST00000442730 IQANK1A0A1B0GTG1 560 aa20.63■□□□□ 0.89
HDLBP-220ENST00000442730 A0A1B0GTL3 188 aa20.63■□□□□ 0.89
HDLBP-220ENST00000442730 CDK2AP1O14519 115 aa20.63■□□□□ 0.89
HDLBP-220ENST00000442730 EEDO75530 441 aaKnown RBP20.63■□□□□ 0.89
HDLBP-220ENST00000442730 TRHRP34981 398 aaPredicted RBP20.63■□□□□ 0.89
HDLBP-220ENST00000442730 BSGP35613 385 aa20.63■□□□□ 0.89
HDLBP-220ENST00000442730 TNFRSF17Q02223 184 aa20.63■□□□□ 0.89
HDLBP-220ENST00000442730 ID2Q02363 134 aa20.63■□□□□ 0.89
HDLBP-220ENST00000442730 OC90Q02509 493 aaPredicted RBP20.63■□□□□ 0.89
HDLBP-220ENST00000442730 SLAMF1Q13291 335 aa20.63■□□□□ 0.89
HDLBP-220ENST00000442730 GGTA1PQ4G0N0 100 aa20.63■□□□□ 0.89
HDLBP-220ENST00000442730 FRG2Q64ET8 278 aa20.63■□□□□ 0.89
HDLBP-220ENST00000442730 WDR93Q6P2C0 686 aa20.63■□□□□ 0.89
HDLBP-220ENST00000442730 TMEM132CQ8N3T6 1108 aa20.63■□□□□ 0.89
HDLBP-220ENST00000442730 SSC4DQ8WTU2 575 aa20.63■□□□□ 0.89
HDLBP-220ENST00000442730 PTPMT1Q8WUK0 201 aaPredicted RBP20.63■□□□□ 0.89
HDLBP-220ENST00000442730 ANKRD9Q96BM1 317 aaPredicted RBP20.63■□□□□ 0.89
HDLBP-220ENST00000442730 C5orf34Q96MH7 638 aa20.63■□□□□ 0.89
HDLBP-220ENST00000442730 FRG2BQ96QU4 278 aa20.63■□□□□ 0.89
HDLBP-220ENST00000442730 ALOXE3Q9BYJ1 711 aa20.63■□□□□ 0.89
HDLBP-220ENST00000442730 KLHL1Q9NR64 748 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms