RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 DMRT3Q9NQL9 472 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 KLHL1Q9NR64 748 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 CPSF2Q9P2I0 782 aaKnown RBP17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 VTI1BQ9UEU0 232 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 TNPO3Q9Y5L0 923 aaKnown RBP17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 UNC79Q9P2D8 2635 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 NCOA6Q14686 2063 aaPredicted RBP17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 TMEM200CA6NKL6 621 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 SAP18O00422 153 aaKnown RBP17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 PRKNO60260 465 aaPredicted RBP17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 UNC5CO95185 931 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 EEF1DP29692 281 aaKnown RBP17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 CYB561P49447 251 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 HLCSP50747 726 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 ARFIP1P53367 373 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 ELAVL1Q15717 326 aaKnown RBP17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 AP5B1Q2VPB7 878 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 OR4C11Q6IEV9 310 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 GFRALQ6UXV0 394 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 GALNTL5Q7Z4T8 443 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 HORMAD2Q8N7B1 307 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 TMEM178AQ8NBL3 297 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 WDR20Q8TBZ3 569 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 PTPMT1Q8WUK0 201 aaPredicted RBP17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 ANKRD9Q96BM1 317 aaPredicted RBP17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 ALOXE3Q9BYJ1 711 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 IPPKQ9H8X2 491 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 ACTR8Q9H981 624 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 ANGPTL3Q9Y5C1 460 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 PCDHGA11Q9Y5H2 935 aa17.63■□□□□ 0.41
HMGB3P22-201ENST00000442010 A0A087WUV0 522 aaPredicted RBP17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 POC1B-GALNT4F8VUJ3 575 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 STX16-NPEPL1H3BU86 382 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 PLPP1O14494 284 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 OR7A17O14581 309 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 STX16O14662 325 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 NME2P1O60361 137 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 LDB3O75112 727 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 SLC25A12O75746 678 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 KRT38O76015 456 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 RBP1P09455 135 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 COL6A2P12110 1019 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 NME2P22392 152 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 CNTFP26441 200 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 GCAP28676 217 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 RPS13P62277 151 aaKnown RBP17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 IGLV3-21P80748 117 aaPredicted RBP17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 DDX39BQ13838 428 aaKnown RBP17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 MAMDC2Q7Z304 686 aaPredicted RBP17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 TMEM132CQ8N3T6 1108 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 ZCCHC7Q8N3Z6 543 aaKnown RBP17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 TMEM151AQ8N4L1 468 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 CEP112Q8N8E3 955 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 PTGR2Q8N8N7 351 aaPredicted RBP17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 UHMK1Q8TAS1 419 aaKnown RBP17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 RGMAQ96B86 450 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 MTERF1Q99551 399 aaKnown RBP17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 PSD3Q9NYI0 1048 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 XPR1Q9UBH6 696 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 SEC14L3Q9UDX4 400 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 NFU1Q9UMS0 254 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 RNF11Q9Y3C5 154 aa17.62■□□□□ 0.41
HMGB3P22-201ENST00000442010 MYOCOSA0A1B0GUC4 107 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 A0A1B0GUH1 482 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 TRIM49D1C9J1S8 452 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 FCHO1O14526 889 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 ETHE1O95571 254 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 ABHD2P08910 425 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 SBK3P0C264 359 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 SSR2P43308 183 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 PIK3CGP48736 1102 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 CPSF6Q16630 551 aaKnown RBP eCLIP17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 TSNAXIP1Q2TAA8 658 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 C1QL3Q5VWW1 255 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 TAOK1Q7L7X3 1001 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 MYLK4Q86YV6 388 aaPredicted RBP17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 SIAH3Q8IW03 269 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 MORN4Q8NDC4 146 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 OR52B6Q8NGF0 335 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 THAP3Q8WTV1 239 aaPredicted RBP17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 NTMT1Q9BV86 223 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 ZBTB26Q9HCK0 441 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 PCTPQ9UKL6 214 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 FBXW2Q9UKT8 454 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 TMCO1Q9UM00 188 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 PPT2Q9UMR5 302 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 IKBKGQ9Y6K9 419 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 DNAJC13O75165 2243 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 ZNF407Q9C0G0 2248 aa17.61■□□□□ 0.41
HMGB3P22-201ENST00000442010 ITGA10O75578 1167 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 IFNA16P05015 189 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 CPN2P22792 545 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 PTX3P26022 381 aaPredicted RBP17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 BSGP35613 385 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 HNRNPH2P55795 449 aaKnown RBP17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 STX4Q12846 297 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 SLAMF1Q13291 335 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 CUL3Q13618 768 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 SERTAD2Q14140 314 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 364.6 ms