RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 UBAP2Q5T6F2 1119 aaKnown RBP18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 KHDRBS2Q5VWX1 349 aaKnown RBP18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 GTF2H2CQ6P1K8 395 aa18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 HUS1BQ8NHY5 278 aa18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 KIF18AQ8NI77 898 aa18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 UHMK1Q8TAS1 419 aaKnown RBP18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 SLC44A1Q8WWI5 657 aa18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 DAZLQ92904 295 aaKnown RBP18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 MTERF1Q99551 399 aaKnown RBP18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 OR51B5Q9H339 312 aa18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 UNC79Q9P2D8 2635 aa18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 PCDHGA11Q9Y5H2 935 aa18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 CENPEQ02224 2701 aa18.53■□□□□ 0.56
SHROOM1-204ENST00000440118 A0A087WUV0 522 aaPredicted RBP18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 WIPF3A6NGB9 483 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 NPIPA5E9PKD4 350 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 CYR61O00622 381 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 CTNSO60931 367 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 SMIM24O75264 130 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 NEURL1O76050 574 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 CLDN1O95832 211 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 COX7A2P14406 83 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 ZNF24P17028 368 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 HLCSP50747 726 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 SERTAD2Q14140 314 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 TSNAXIP1Q2TAA8 658 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 ZNF468Q5VIY5 522 aaPredicted RBP18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 LIPJQ5W064 366 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 ZNF793Q6ZN11 406 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 GOLGA7Q7Z5G4 137 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 CYP4Z2PQ8N1L4 340 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 PTGR2Q8N8N7 351 aaPredicted RBP18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 APCDD1LQ8NCL9 501 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 OR14A16Q8NHC5 309 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 RGMAQ96B86 450 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 MAPKAP1Q9BPZ7 522 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 ALOXE3Q9BYJ1 711 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 OR8D2Q9GZM6 311 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 IPPKQ9H8X2 491 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 DMRT3Q9NQL9 472 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 NPIPA1Q9UND3 350 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 ERVK-11Q9UQG0 969 aa18.52■□□□□ 0.56
SHROOM1-204ENST00000440118 MYOCOSA0A1B0GUC4 107 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 EXOC1LA0A1B0GW35 172 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 TGFBR3LH3BV60 316 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 NME2P1O60361 137 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 UGDHO60701 494 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 ZG16O60844 167 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 LDB3O75112 727 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 ITGA10O75578 1167 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 ZFAND5O76080 213 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 RBP1P09455 135 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 NME2P22392 152 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 CNTFP26441 200 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 PIK3CBP42338 1070 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 SSR4P51571 173 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 ID2Q02363 134 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 E2F2Q14209 437 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 CPSF6Q16630 551 aaKnown RBP eCLIP18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 TECRLQ5HYJ1 363 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 UBE3DQ7Z6J8 389 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 CEP112Q8N8E3 955 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 SREK1Q8WXA9 508 aaKnown RBP18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 PHF21BQ96EK2 531 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 FRMD6Q96NE9 622 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 XPR1Q9UBH6 696 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 COPS7AQ9UBW8 275 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 PHF11Q9UIL8 331 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 TMCO1Q9UM00 188 aa18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 KLF13Q9Y2Y9 288 aaPredicted RBP18.51■□□□□ 0.55
SHROOM1-204ENST00000440118 LRRC14BA6NHZ5 514 aa18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 C17orf105B2RV13 164 aa18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 CCL21O00585 134 aa18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 DYRK3O43781 588 aa18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 SIX3O95343 332 aaPredicted RBP18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 TLX1P31314 330 aaPredicted RBP18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 TRHRP34981 398 aaPredicted RBP18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 CCNG1P51959 295 aa18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 RPS13P62277 151 aaKnown RBP18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 SLAMF1Q13291 335 aa18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 PCBP2Q15366 365 aaKnown RBP eCLIP18.5■□□□□ 0.552e-8■■■□□ 14.6
SHROOM1-204ENST00000440118 OR4C11Q6IEV9 310 aa18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 HSDL2Q6YN16 418 aa18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 RNF175Q8N4F7 328 aa18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 ASB15Q8WXK1 588 aa18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 GPR137Q96N19 417 aa18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 SORBS1Q9BX66 1292 aaKnown RBP18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 FUT8Q9BYC5 575 aa18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 MS4A12Q9NXJ0 267 aa18.5■□□□□ 0.55
SHROOM1-204ENST00000440118 ASPDHA6ND91 283 aa18.49■□□□□ 0.55
SHROOM1-204ENST00000440118 A8MVJ9 347 aa18.49■□□□□ 0.55
SHROOM1-204ENST00000440118 TRIM49D1C9J1S8 452 aa18.49■□□□□ 0.55
SHROOM1-204ENST00000440118 KLRC4-KLRK1H3BQV0 150 aa18.49■□□□□ 0.55
SHROOM1-204ENST00000440118 TFECO14948 347 aaPredicted RBP18.49■□□□□ 0.55
SHROOM1-204ENST00000440118 KLK8O60259 260 aa18.49■□□□□ 0.55
SHROOM1-204ENST00000440118 SLC19A2O60779 497 aa18.49■□□□□ 0.55
SHROOM1-204ENST00000440118 SCELO95171 688 aa18.49■□□□□ 0.55
SHROOM1-204ENST00000440118 CLDN9O95484 217 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms