RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 ATAT1Q5SQI0 421 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 MANEALQ5VSG8 457 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 CBLL1Q75N03 491 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 ZBTB2Q8N680 514 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 GPRC5AQ8NFJ5 357 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 SLC5A11Q8WWX8 675 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 ZIC5Q96T25 663 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 TMEM245Q9H330 911 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 SDHAF3Q9NRP4 125 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 NDRG2Q9UN36 371 aaKnown RBP11.22□□□□□ -0.61
SMPD4-209ENST00000439886 TLR6Q9Y2C9 796 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 PSME4Q14997 1843 aa11.21□□□□□ -0.61
SMPD4-209ENST00000439886 NUMA1Q14980 2115 aa11.21□□□□□ -0.61
SMPD4-209ENST00000439886 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.21□□□□□ -0.61
SMPD4-209ENST00000439886 LEUTXA8MZ59 168 aa11.21□□□□□ -0.61
SMPD4-209ENST00000439886 PRAMEF11O60813 436 aa11.21□□□□□ -0.61
SMPD4-209ENST00000439886 HMGN1P05114 100 aa11.21□□□□□ -0.61
SMPD4-209ENST00000439886 TACR2P21452 398 aa11.21□□□□□ -0.61
SMPD4-209ENST00000439886 HMGB2P26583 209 aaKnown RBP11.21□□□□□ -0.61
SMPD4-209ENST00000439886 ZNF177Q13360 481 aaPredicted RBP11.21□□□□□ -0.61
SMPD4-209ENST00000439886 LARS2Q15031 903 aaKnown RBP11.21□□□□□ -0.61
SMPD4-209ENST00000439886 PCBP2Q15366 365 aaKnown RBP eCLIP11.21□□□□□ -0.613e-6■■■■□ 25.6
SMPD4-209ENST00000439886 SSX1Q16384 188 aa11.21□□□□□ -0.61
SMPD4-209ENST00000439886 XKR6Q5GH73 641 aa11.21□□□□□ -0.61
SMPD4-209ENST00000439886 ERICH5Q6P6B1 374 aa11.21□□□□□ -0.61
SMPD4-209ENST00000439886 RTP3Q9BQQ7 232 aa11.21□□□□□ -0.61
SMPD4-209ENST00000439886 SRRQ9GZT4 340 aa11.21□□□□□ -0.61
SMPD4-209ENST00000439886 RACGAP1Q9H0H5 632 aa11.21□□□□□ -0.61
SMPD4-209ENST00000439886 LINC00597Q9H2U6 94 aa11.21□□□□□ -0.61
SMPD4-209ENST00000439886 CLEC4MQ9H2X3 399 aaPredicted RBP11.21□□□□□ -0.61
SMPD4-209ENST00000439886 ING4Q9UNL4 249 aa11.21□□□□□ -0.61
SMPD4-209ENST00000439886 FCF1Q9Y324 198 aaKnown RBP11.21□□□□□ -0.61
SMPD4-209ENST00000439886 C5orf58C9J3I9 102 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 TLR4O00206 839 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 NDUFA2O43678 99 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 ORC5O43913 435 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 MTX2O75431 263 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 PRPS2P11908 318 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 HLA-EP13747 358 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 GZMKP49863 264 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 SAXO2Q658L1 398 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 PLAG1Q6DJT9 500 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 LUZP2Q86TE4 346 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 HJURPQ8NCD3 748 aaPredicted RBP11.21□□□□□ -0.62
SMPD4-209ENST00000439886 SETD6Q8TBK2 473 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 ZFAND1Q8TCF1 268 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 GATAD2BQ8WXI9 593 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 DOHHQ9BU89 302 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 TMED9Q9BVK6 235 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 MGAT4AQ9UM21 535 aa11.21□□□□□ -0.62
SMPD4-209ENST00000439886 C17orf102A2RUQ5 167 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 FABP7O15540 132 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 HPGDSO60760 199 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 MYL12AP19105 171 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 PSPHP78330 225 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 PUDPQ08623 228 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 HYAL2Q12891 473 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 BCL2L15Q5TBC7 163 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 RNF219Q5W0B1 726 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-209ENST00000439886 LAPTM4BQ86VI4 370 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 RNF130Q86XS8 419 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 KLHL6Q8WZ60 621 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 SPATA9Q9BWV2 254 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 TRPS1Q9UHF7 1281 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 ACAD8Q9UKU7 415 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 KLK4Q9Y5K2 254 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 CFAP20Q9Y6A4 193 aaKnown RBP11.2□□□□□ -0.62
SMPD4-209ENST00000439886 A3GALT2U3KPV4 340 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 CCDC88CQ9P219 2028 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 SMIM35A0A1B0GVV1 85 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 ANXA4P09525 319 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-209ENST00000439886 EBLN1P0CF75 366 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 HOXB1P14653 301 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-209ENST00000439886 ZNF81P51508 661 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 TTLL9Q3SXZ7 439 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 OR2G6Q5TZ20 316 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 CNIH2Q6PI25 160 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 BHLHB9Q6PI77 547 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 PDZD3Q86UT5 571 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 CALHM3Q86XJ0 350 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 TMC8Q8IU68 726 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 C9orf43Q8TAL5 461 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-209ENST00000439886 FBLIM1Q8WUP2 373 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 MAGEB10Q96LZ2 347 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-209ENST00000439886 QRFPRQ96P65 431 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 OPALINQ96PE5 141 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 AP5M1Q9H0R1 490 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 STARD7Q9NQZ5 370 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 SNAI1O95863 264 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-209ENST00000439886 EPORP19235 508 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 TYMPP19971 482 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 PRKAR1BP31321 381 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 CSTF2P33240 577 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMPD4-209ENST00000439886 PSEN2P49810 448 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 CLCN7P51798 805 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 P2RY14Q15391 338 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 BEST4Q8NFU0 473 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 CHIAQ9BZP6 476 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 RANBP3Q9H6Z4 567 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-209ENST00000439886 TAS2R7Q9NYW3 318 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms