RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 ILF3Q12906 894 aaKnown RBP eCLIP6.14□□□□□ -1.43
BDNF-211ENST00000439476 SF1Q15637 639 aaKnown RBP6.14□□□□□ -1.43
BDNF-211ENST00000439476 SLC6A19Q695T7 634 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 FBXL22Q6P050 247 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 BRAT1Q6PJG6 821 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 LINGO4Q6UY18 593 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 RANBP10Q6VN20 620 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 GPRIN1Q7Z2K8 1008 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 RETREG3Q86VR2 466 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 SLC37A3Q8NCC5 494 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 DNASE1L2Q92874 299 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 IMP4Q96G21 291 aaKnown RBP6.14□□□□□ -1.43
BDNF-211ENST00000439476 TOE1Q96GM8 510 aaKnown RBP6.14□□□□□ -1.43
BDNF-211ENST00000439476 EBPLQ9BY08 206 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 BTBD1Q9H0C5 482 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 MIR1-1HGQ9H1L0 117 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 TXNRD2Q9NNW7 524 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 ABCB9Q9NP78 766 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 ANKMY1Q9P2S6 941 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 RNF6Q9Y252 685 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 PCDHGB5Q9Y5G0 923 aa6.14□□□□□ -1.43
BDNF-211ENST00000439476 PDE4DIPQ5VU43 2346 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 ANXA2P2A6NMY6 339 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 SCN2BO60939 215 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 TBX18O95935 607 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 CYB5AP00167 134 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 MT-ND2P03891 347 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 ANXA2P07355 339 aaKnown RBP6.13□□□□□ -1.43
BDNF-211ENST00000439476 NUDT1P36639 197 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 ACVRL1P37023 503 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 FOXA1P55317 472 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 GABARAPL2P60520 117 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 RBBP4Q09028 425 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 CAMK1Q14012 370 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 PTGR1Q14914 329 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 OR4D1Q15615 310 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 DUOXA1Q1HG43 343 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 ZNF783Q6ZMS7 281 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 PLEKHG7Q6ZR37 379 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 NPAS4Q8IUM7 802 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 UBE2J2Q8N2K1 259 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 OR8J3Q8NGG0 315 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 TSEN15Q8WW01 171 aaKnown RBP6.13□□□□□ -1.43
BDNF-211ENST00000439476 GTPBP3Q969Y2 492 aaKnown RBP6.13□□□□□ -1.43
BDNF-211ENST00000439476 ZDHHC12Q96GR4 267 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 SH3YL1Q96HL8 342 aaPredicted RBP6.13□□□□□ -1.43
BDNF-211ENST00000439476 C5orf34Q96MH7 638 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 ZSWIM3Q96MP5 696 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 KCNC2Q96PR1 638 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 MENTQ9BUN1 341 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 OR2B2Q9GZK3 357 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 SMOC2Q9H3U7 446 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 ELL3Q9HB65 397 aaPredicted RBP6.13□□□□□ -1.43
BDNF-211ENST00000439476 ENAMQ9NRM1 1142 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 A0A1W2PRB8 838 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 DAPL1A0PJW8 107 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 CLIC1O00299 241 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 RGS13O14921 159 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 SCAMP2O15127 329 aaKnown RBP6.13□□□□□ -1.43
BDNF-211ENST00000439476 RAB36O95755 333 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 RENP00797 406 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 FGF4P08620 206 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 PSKH1P11801 424 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 HSD3B1P14060 373 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 CSNK2A2P19784 350 aaPredicted RBP6.13□□□□□ -1.43
BDNF-211ENST00000439476 HSD3B2P26439 372 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 GABRB3P28472 473 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 GDF5P43026 501 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 NRIP1P48552 1158 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 NCS1P62166 190 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 CDC20Q12834 499 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 ZNF155Q12901 538 aaPredicted RBP6.13□□□□□ -1.43
BDNF-211ENST00000439476 DUSP4Q13115 394 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 MAB21L1Q13394 359 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 SERINC3Q13530 473 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 AARDQ4LEZ3 155 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 PKDCCQ504Y2 493 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 KANK2Q63ZY3 851 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 FRRS1Q6ZNA5 592 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 CFAP77Q6ZQR2 320 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 LYSMD3Q7Z3D4 306 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 GOLGA7Q7Z5G4 137 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 TAF8Q7Z7C8 310 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 KHSRPQ92945 711 aaKnown RBP eCLIP6.13□□□□□ -1.43
BDNF-211ENST00000439476 LRCH3Q96II8 777 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 RADILQ96JH8 1075 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 ATG10Q9H0Y0 220 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 RANBP3Q9H6Z4 567 aaPredicted RBP6.13□□□□□ -1.43
BDNF-211ENST00000439476 MGAT4BQ9UQ53 548 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 RBM7Q9Y580 266 aaKnown RBP6.13□□□□□ -1.43
BDNF-211ENST00000439476 AP1M2Q9Y6Q5 423 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 PRAMEF33A0A0G2JMD5 474 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 PPP6CO00743 305 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 PCDH7O60245 1069 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 HCN1O60741 890 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 PRAMEF10O60809 474 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 FABP1P07148 127 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 ALDOCP09972 364 aaKnown RBP6.13□□□□□ -1.43
BDNF-211ENST00000439476 MATN1P21941 496 aa6.13□□□□□ -1.43
BDNF-211ENST00000439476 BLKP51451 505 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms