RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 SLITRK5O94991 958 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 SLC16A8O95907 504 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 HRGP04196 525 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 CYP17A1P05093 508 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 FPR1P21462 350 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 ABHD18Q0P651 414 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 CRTC2Q53ET0 693 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 RPS26P11Q5JNZ5 115 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 SYT6Q5T7P8 510 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 PNCKQ6P2M8 343 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 USP30Q70CQ3 517 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 PRSS48Q7RTY5 328 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 CCDC28AQ8IWP9 274 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 NAGSQ8N159 534 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 TCEANCQ8N8B7 351 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 HMGB4Q8WW32 186 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 TTLL2Q9BWV7 592 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 NARFLQ9H6Q4 476 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 KLHL1Q9NR64 748 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 MRPL15Q9P015 296 aaKnown RBP9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 OSGIN1Q9UJX0 560 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 PCDHGA6Q9Y5G7 932 aa9.52□□□□□ -0.89
CDC42SE1-202ENST00000439374 GREB1Q4ZG55 1949 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 A0A0X1KG70 313 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 H3BQ06 376 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 MYL12BO14950 172 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 POP4O95707 220 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 CST5P28325 142 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 METAP1P53582 386 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 RPS13P62277 151 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 MLLT1Q03111 559 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 DOC2AQ14183 400 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 FGFBP1Q14512 234 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 CPTPQ5TA50 214 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 GDPD4Q6W3E5 623 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 OR4A15Q8NGL6 344 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 NFKBIDQ8NI38 313 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 C2orf15Q8WU43 125 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 ASZ1Q8WWH4 475 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 TADA1Q96BN2 335 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 ST6GAL2Q96JF0 529 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 DUSP21Q9H596 190 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 TPT1P8Q9HAU6 139 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 TBC1D24Q9ULP9 559 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 CASP8AP2Q9UKL3 1982 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 C2orf92A0A1B0GVN3 265 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 ANTXRLA6NF34 631 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 CASKO14936 926 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 PTTG1O95997 202 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 YES1P07947 543 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 EBLN1P0CF75 366 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 C7P10643 843 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 PTGS2P35354 604 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 GABARAPL2P60520 117 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 C2orf80Q0P641 193 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 KRT33BQ14525 404 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 TATDN3Q17R31 274 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 WSCD2Q2TBF2 565 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 GRASPQ7Z6J2 395 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 THOC6Q86W42 341 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 DNAJC5GQ8N7S2 189 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 VPS37AQ8NEZ2 397 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 RDH12Q96NR8 316 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 FAM129BQ96TA1 746 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 PRR14Q9BWN1 585 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 BRINP2Q9C0B6 783 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 RABL2AQ9UBK7 228 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 ASF1AQ9Y294 204 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 TRBV23OR9-2A0A075B6M9 112 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 LOC105369274A0A096LPK9 316 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 HIDE1A8MVS5 230 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 SIGLEC5O15389 551 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 CATP04040 527 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 POU3F3P20264 500 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 AVPR1BP47901 424 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 ARHGDIBP52566 201 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 P2RX3P56373 397 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 SIGLEC14Q08ET2 396 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 PPIGQ13427 754 aaKnown RBP eCLIP9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 ASTLQ6HA08 431 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 SHQ1Q6PI26 577 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 AGTRAPQ6RW13 159 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 TMEM150AQ86TG1 271 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 LHFPL3Q86UP9 236 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 FAM20CQ8IXL6 584 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 OR4N4Q8N0Y3 316 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 GOLM1Q8NBJ4 401 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 DOK4Q8TEW6 326 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 APH1BQ8WW43 257 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 GATAD2BQ8WXI9 593 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 FRMD6Q96NE9 622 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 YIPF4Q9BSR8 244 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 BTBD2Q9BX70 525 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 MUC13Q9H3R2 512 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 MIEF1Q9NQG6 463 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 VPS29Q9UBQ0 182 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 SATB2Q9UPW6 733 aa9.51□□□□□ -0.89
CDC42SE1-202ENST00000439374 SPEGQ15772 3267 aa9.5□□□□□ -0.89
CDC42SE1-202ENST00000439374 ANKDD1BA6NHY2 528 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms