RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 SORBS1Q9BX66 1292 aaKnown RBP13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 EHD1Q9H4M9 534 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 DMRT3Q9NQL9 472 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 ERVK-18Q9QC07 812 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 BTNL2Q9UIR0 455 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 ASF1AQ9Y294 204 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 SHISA7A6NL88 538 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 SLC16A6O15403 523 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 SLC31A1O15431 190 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 C6orf47O95873 294 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 C1GALT1C1LP0DN25 315 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 ETFAP13804 333 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 TNFRSF1BP20333 461 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 DNAJA1P31689 397 aaKnown RBP13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 PCDH1Q08174 1060 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 CDK5R2Q13319 367 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 ANXA8L1Q5VT79 327 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 ATG16L2Q8NAA4 619 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 OR5AR1Q8NGP9 310 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 OR5AK3PQ8NH89 298 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 COQ8BQ96D53 544 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 REPS1Q96D71 796 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 MAGED4Q96JG8 741 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 BTBD2Q9BX70 525 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 SGPP1Q9BX95 441 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 CHST8Q9H2A9 424 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 CCDC177Q9NQR7 707 aaPredicted RBP13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 THUMPD1Q9NXG2 353 aaKnown RBP13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 SCML1Q9UN30 329 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 SNX5Q9Y5X3 404 aa13.25□□□□□ -0.29
PTCHD3-201ENST00000438700 ZNF99A8MXY4 864 aaPredicted RBP13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 M0R3G1 203 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 KMOO15229 486 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 ANGPTL1O95841 491 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 KLK1P06870 262 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 ACADMP11310 421 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 NDUFV2P19404 249 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 FPR1P21462 350 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 GSSP48637 474 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 CLK3P49761 638 aaKnown RBP13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 PNLIPRP1P54315 467 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 RPA4Q13156 261 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 KDM4DQ6B0I6 523 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 UNC5DQ6UXZ4 953 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 PLEKHG7Q6ZR37 379 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 MMP21Q8N119 569 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 PGBD3Q8N328 593 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 PSMA8Q8TAA3 256 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 SLC5A11Q8WWX8 675 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 POP5Q969H6 163 aaKnown RBP13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 METTL2AQ96IZ6 378 aaKnown RBP13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 C1QTNF7Q9BXJ2 289 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 REEP4Q9H6H4 257 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 REEP1Q9H902 201 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 GPATCH2Q9NW75 528 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 SIRT5Q9NXA8 310 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 SPASTQ9UBP0 616 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 NCKAP1Q9Y2A7 1128 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 ZNF451Q9Y4E5 1061 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 RNASET2O00584 256 aaKnown RBP13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 SUV39H1O43463 412 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 ITGAMP11215 1152 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 ACP5P13686 325 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 HOXB6P17509 224 aaKnown RBP13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 NR4A2P43354 598 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 TAS2R50P59544 299 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 MLLT1Q03111 559 aaPredicted RBP13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 CCINQ13939 588 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 VEZF1Q14119 521 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 E2F2Q14209 437 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 TMEM31Q5JXX7 168 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 METRNLQ641Q3 311 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 CAMKMTQ7Z624 323 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 CLIP4Q8N3C7 705 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 PSD4Q8NDX1 1056 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 FAM3CQ92520 227 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 SLC35A5Q9BS91 424 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 EFCAB11Q9BUY7 163 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 PHF7Q9BWX1 381 aaPredicted RBP13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 WDR12Q9GZL7 423 aaKnown RBP13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 RUBCNLQ9H714 662 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 ZNF229Q9UJW7 825 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 PLXND1Q9Y4D7 1925 aa13.24□□□□□ -0.29
PTCHD3-201ENST00000438700 TCRBV21S2A2A0A5A6 115 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 GPR89AB7ZAQ6 455 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 GPR89BP0CG08 455 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 SEPHS1P49903 392 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 KCNJ10P78508 379 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 C2orf80Q0P641 193 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 SMN1Q16637 294 aaKnown RBP13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 CYP27C1Q4G0S4 372 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 ZC3H12BQ5HYM0 836 aaKnown RBP13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 EOGTQ5NDL2 527 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 NXPE4Q6UWF7 544 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 USP30Q70CQ3 517 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 PAGE2Q7Z2X7 111 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 LRRC56Q8IYG6 542 aaPredicted RBP13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 TTC29Q8NA56 475 aaPredicted RBP13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 SPPL2AQ8TCT8 520 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 TFGQ92734 400 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms