RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 FBXO30Q8TB52 745 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 GANCQ8TET4 914 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 LRRC15Q8TF66 581 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 CNRIP1Q96F85 164 aaPredicted RBP3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 CFAP36Q96G28 342 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 ATXN7L3BQ96GX2 97 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 SLC45A3Q96JT2 553 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 TSGA13Q96PP4 275 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 GSDMAQ96QA5 445 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 GAL3ST4Q96RP7 486 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 LZTS2Q9BRK4 669 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 UBAC1Q9BSL1 405 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 LRRC61Q9BV99 259 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 UBXN6Q9BZV1 441 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 PARLQ9H300 379 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 RWDD1Q9H446 243 aaPredicted RBP3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 RPAP3Q9H6T3 665 aaPredicted RBP3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 RAB9BQ9NP90 201 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 SPG21Q9NZD8 308 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 MUTYHQ9UIF7 546 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 UMODL1Q5DID0 1318 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 IGHV4-30-2A0A087WSY4 118 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 A0A087X0K7 114 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 NTN3O00634 580 aaPredicted RBP3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 CCSO14618 274 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 TTI1O43156 1089 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 TLX2O43763 284 aaPredicted RBP3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 KINO60870 393 aaKnown RBP3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 RTN2O75298 545 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 NXPH4O95158 308 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 SLC4A1P02730 911 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 KRT13P13646 458 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 VCLP18206 1134 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 CTNNB1P35222 781 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 CAPGP40121 348 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 NDST2P52849 883 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 COX10Q12887 443 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 RAPSNQ13702 412 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 KIAA0141Q14154 515 aaPredicted RBP3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 LY6DQ14210 128 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 RCN2Q14257 317 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 ANKDD1AQ495B1 522 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 ETFRF1Q6IPR1 90 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 GALNT17Q6IS24 598 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 GDPGP1Q6ZNW5 385 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 C17orf107Q6ZR85 190 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 CDHR3Q6ZTQ4 885 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 KRTAP7-1Q8IUC3 87 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 CCDC83Q8IWF9 413 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 ZC3H3Q8IXZ2 948 aaKnown RBP3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 PEX5LQ8IYB4 626 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 TDHQ8IZJ6 230 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 SLC43A2Q8N370 569 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 HDDC3Q8N4P3 179 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 Q8NBF4 154 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 DENND6BQ8NEG7 585 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 SPPL2AQ8TCT8 520 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 NPRL2Q8WTW4 380 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 ULK4Q96C45 1275 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 BPIFA2Q96DR5 249 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 VPS39Q96JC1 886 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 C18orf12Q96KH6 178 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 PRICKLE1Q96MT3 831 aaPredicted RBP3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 PKP2Q99959 881 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 VGLL1Q99990 258 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 CABLES2Q9BTV7 478 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 LRRC2Q9BYS8 371 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 AKIRIN1Q9H9L7 192 aaPredicted RBP3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 RNPEPL1Q9HAU8 725 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 UBE2TQ9NPD8 197 aaPredicted RBP3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 AKAP7Q9P0M2 348 aaPredicted RBP3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 C6orf203Q9P0P8 240 aaPredicted RBP3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 TRPC4Q9UBN4 977 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 IL19Q9UHD0 177 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 PCSK1NQ9UHG2 260 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 ERVK-19Q9WJR5 959 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF510Q9Y2H8 683 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 TMED7Q9Y3B3 224 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 AP1M2Q9Y6Q5 423 aa3.16□□□□□ -1.9
LSM1P1-201ENST00000438629 A0A1W2PRV1 198 aa3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 SYCE3A1L190 88 aa3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 CCDC162PA2VCL2 907 aa3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 LMO7DNF2Z398 122 aa3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 CACNB4O00305 520 aaPredicted RBP3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 MLNRO43193 412 aa3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 GAS8O95995 478 aa3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 TPM3P06753 285 aa3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 HEXBP07686 556 aa3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 CPA3P15088 417 aa3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 RPS2P15880 293 aaKnown RBP3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 ARF4P18085 180 aaPredicted RBP3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 ACKR3P25106 362 aa3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 CASP3P42574 277 aa3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 CRYBA2P53672 197 aa3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 ABCE1P61221 599 aaKnown RBP3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 MS4A2Q01362 244 aa3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 LRRC74AQ0VAA2 488 aa3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 MRPL28Q13084 256 aaKnown RBP3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 GPR50Q13585 617 aa3.15□□□□□ -1.91
LSM1P1-201ENST00000438629 LASP1Q14847 261 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms