RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 PRTFDC1Q9NRG1 225 aa13.89□□□□□ -0.19
RPUSD3-208ENST00000433972 FBXW2Q9UKT8 454 aa13.89□□□□□ -0.19
RPUSD3-208ENST00000433972 IKZF3Q9UKT9 509 aa13.89□□□□□ -0.19
RPUSD3-208ENST00000433972 PPT2Q9UMR5 302 aa13.89□□□□□ -0.19
RPUSD3-208ENST00000433972 PPIEQ9UNP9 301 aaKnown RBP13.89□□□□□ -0.19
RPUSD3-208ENST00000433972 YARS2Q9Y2Z4 477 aaKnown RBP13.89□□□□□ -0.19
RPUSD3-208ENST00000433972 HMX2A2RU54 273 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 CLGNO14967 610 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 ERI3O43414 337 aaKnown RBP13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 KERAO60938 352 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 ITGA10O75578 1167 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 CLEC3AO75596 197 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 STK16O75716 305 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 ZFAND5O76080 213 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 ALDOAP04075 364 aaKnown RBP13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 SNRPB2P08579 225 aaKnown RBP13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 CAPN3P20807 821 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 SSR4P51571 173 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 RAB38P57729 211 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 SLBPQ14493 270 aaKnown RBP eCLIP13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 TSNAXIP1Q2TAA8 658 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 UBAP2Q5T6F2 1119 aaKnown RBP13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 ARHGAP11AQ6P4F7 1023 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 EMBQ6PCB8 327 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 SLCO4C1Q6ZQN7 724 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 ISCA2Q86U28 154 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 DOLPP1Q86YN1 238 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 SCUBE1Q8IWY4 988 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 TMEM132CQ8N3T6 1108 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 SRFBP1Q8NEF9 429 aaKnown RBP13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 OR2L5Q8NG80 312 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 C16orf52Q8NHV5 167 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 KCTD4Q8WVF5 259 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 DAZLQ92904 295 aaKnown RBP13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 MS4A6EQ96DS6 147 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 C14orf79Q96F83 325 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 SERINC2Q96SA4 455 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 TRIM8Q9BZR9 551 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 ROGDIQ9GZN7 287 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 REXO4Q9GZR2 422 aaKnown RBP13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 KLHL31Q9H511 634 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 IGSF5Q9NSI5 407 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 NUDT4Q9NZJ9 180 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 PSMC3IPQ9P2W1 217 aaPredicted RBP13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 ERVK-11Q9UQG0 969 aa13.88□□□□□ -0.19
RPUSD3-208ENST00000433972 LRIT2A6NDA9 550 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 A8MUA0 341 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 A8MVJ9 347 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 SUPT3HB4E1H0 165 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 ACOT7O00154 380 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 PEX1O43933 1283 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 DNAJB6O75190 326 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 SUPT3HO75486 399 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 GGT5P36269 586 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 SLC6A12P48065 614 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 ST13P50502 369 aaKnown RBP13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 LAPTM5Q13571 262 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 OR4D1Q15615 310 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 ELAVL1Q15717 326 aaKnown RBP13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 HIST2H2ACQ16777 129 aaPredicted RBP13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 PAGE2BQ5JRK9 111 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 HIST2H2AA3Q6FI13 130 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 RGS9BPQ6ZS82 235 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 SULF2Q8IWU5 870 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 ZFP62Q8NB50 900 aaPredicted RBP13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 FAM57AQ8TBR7 257 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 ASB5Q8WWX0 329 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 EXT2Q93063 718 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 ISL2Q96A47 359 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 SCYL1Q96KG9 808 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 EFCAB11Q9BUY7 163 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 PNO1Q9NRX1 252 aaKnown RBP13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 DNAJC11Q9NVH1 559 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 HPF1Q9NWY4 346 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 TMCO1Q9UM00 188 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 ASB1Q9Y576 335 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 CLCA3PQ9Y6N3 262 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 SPACA6W5XKT8 324 aa13.87□□□□□ -0.19
RPUSD3-208ENST00000433972 CDC40O60508 579 aaKnown RBP eCLIP13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 WISP2O76076 250 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 TPOP07202 933 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 GFAPP14136 432 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 KCNC1P48547 511 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 MTTPP55157 894 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 VSNL1P62760 191 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 HSF1Q00613 529 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 DLG1Q12959 904 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 SERTAD2Q14140 314 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 ERCC6LQ2NKX8 1250 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 ADPRMQ3LIE5 342 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 TIFABQ6ZNK6 161 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 LCA5Q86VQ0 697 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 ZNF227Q86WZ6 799 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 CENPLQ8N0S6 344 aaPredicted RBP13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 SNX31Q8N9S9 440 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 PDPRQ8NCN5 879 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 ASB15Q8WXK1 588 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 UBE2E3Q969T4 207 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 NCLNQ969V3 563 aa13.86□□□□□ -0.19
RPUSD3-208ENST00000433972 SDCCAG3Q96C92 435 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms