RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 MED27Q6P2C8 311 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 ZCCHC23Q6ZST2 131 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 MILR1Q7Z6M3 343 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 GOLGA6L1Q8N7Z2 621 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 METTL21AQ8WXB1 218 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 SMIM10Q96HG1 83 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 MAGEB10Q96LZ2 347 aaPredicted RBP15.91■□□□□ 0.14
UBE3D-204ENST00000430071 TAAR6Q96RI8 345 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 SLC29A3Q9BZD2 475 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 SLC6A16Q9GZN6 736 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 RHBGQ9H310 441 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 ERRFI1Q9UJM3 462 aaPredicted RBP15.91■□□□□ 0.14
UBE3D-204ENST00000430071 WDR91A4D1P6 747 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 ANKUB1A6NFN9 424 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 HMGB1P1B2RPK0 211 aaPredicted RBP15.9■□□□□ 0.14
UBE3D-204ENST00000430071 H0YIV9 168 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 OR4F21O95013 312 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 MLYCDO95822 493 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 PCNAP12004 261 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 HPDP32754 393 aaPredicted RBP15.9■□□□□ 0.14
UBE3D-204ENST00000430071 SLC18A1P54219 525 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 ARG2P78540 354 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 PWP1Q13610 501 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 TLR1Q15399 786 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 BTBD16Q32M84 506 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 GGTA1PQ4G0N0 100 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 SFT2D3Q587I9 215 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 TOR1AIP1Q5JTV8 583 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 CFAP157Q5JU67 520 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 RIPOR1Q6ZS17 1223 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 GPRIN3Q6ZVF9 776 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 RNF175Q8N4F7 328 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 PLPP5Q8NEB5 264 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 TRPV3Q8NET8 790 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 OR6Y1Q8NGX8 325 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 MGARPQ8TDB4 240 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 AGAP11Q8TF27 550 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 HAS2Q92819 552 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 TUBB6Q9BUF5 446 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 ACBD3Q9H3P7 528 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 TNFRSF12AQ9NP84 129 aa15.9■□□□□ 0.14
UBE3D-204ENST00000430071 ANKDD1BA6NHY2 528 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 A8MUI8 341 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 BIRC5O15392 142 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 B4GALT2O60909 372 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 SERPINA6P08185 405 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 GSTM2P28161 218 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 HNRNPH1P31943 449 aaKnown RBP15.89■□□□□ 0.13
UBE3D-204ENST00000430071 ARRB2P32121 409 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 TNFSF10P50591 281 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 PKNOX1P55347 436 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 NAA20P61599 178 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 ASPHQ12797 758 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 ABRAXAS2Q15018 415 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 HERC3Q15034 1050 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 NSDHLQ15738 373 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 NUDCD3Q8IVD9 361 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 TTLQ8NG68 377 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 WDR20Q8TBZ3 569 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 ZNF473Q8WTR7 871 aaKnown RBP15.89■□□□□ 0.13
UBE3D-204ENST00000430071 SSC4DQ8WTU2 575 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 UBE2E3Q969T4 207 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 SHCBP1LQ9BZQ2 653 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 TRPS1Q9UHF7 1281 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 PCDHGA11Q9Y5H2 935 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 ITPR2Q14571 2701 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 DNAJC13O75165 2243 aa15.89■□□□□ 0.13
UBE3D-204ENST00000430071 A1L4Q6 167 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 CLEC3AO75596 197 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 CHRNGP07510 517 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 FHP07954 510 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 GP1BBP13224 206 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 NEK2P51955 445 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 RGS1Q08116 209 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 DDX39BQ13838 428 aaKnown RBP15.88■□□□□ 0.13
UBE3D-204ENST00000430071 HHATQ5VTY9 493 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 PLAG1Q6DJT9 500 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 PAPD4Q6PIY7 484 aaKnown RBP15.88■□□□□ 0.13
UBE3D-204ENST00000430071 KIF2BQ8N4N8 673 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 CDYL2Q8N8U2 506 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 HUS1BQ8NHY5 278 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 FAR1Q8WVX9 515 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 CCT6BQ92526 530 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 TBC1D20Q96BZ9 403 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 SEC16BQ96JE7 1060 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 KCNA7Q96RP8 456 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 PAIP2Q9BPZ3 127 aaKnown RBP15.88■□□□□ 0.13
UBE3D-204ENST00000430071 MID1IP1Q9NPA3 183 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 DMRT3Q9NQL9 472 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 NECTIN3Q9NQS3 549 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 STK38LQ9Y2H1 464 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 TSC22D4Q9Y3Q8 395 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 ZNF407Q9C0G0 2248 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 CELSR2Q9HCU4 2923 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 UNC79Q9P2D8 2635 aa15.88■□□□□ 0.13
UBE3D-204ENST00000430071 LRIT2A6NDA9 550 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 DYNC1I1O14576 645 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 PCDH17O14917 1159 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 NPHS1O60500 1241 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 ESRRBO95718 433 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms