RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 DPY30Q9C005 99 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 MN1Q10571 1320 aaPredicted RBP9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 HYKKA2RU49 373 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 EIF4E1BA6NMX2 242 aaKnown RBP9□□□□□ -0.97
HMGCLL1-206ENST00000428842 TGFBR3LH3BV60 316 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 DFNA5O60443 496 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 AIFM1O95831 613 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 FAM58BPP0C7Q3 252 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 MAOAP21397 527 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 PRDX6P30041 224 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 RPS26P62854 115 aaKnown RBP9□□□□□ -0.97
HMGCLL1-206ENST00000428842 NR1D2Q14995 579 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 SUZ12Q15022 739 aaKnown RBP9□□□□□ -0.97
HMGCLL1-206ENST00000428842 GSTA3Q16772 222 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 C3orf38Q5JPI3 329 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 OGFOD2Q6N063 350 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 TMEM214Q6NUQ4 689 aaKnown RBP9□□□□□ -0.97
HMGCLL1-206ENST00000428842 WDR74Q6RFH5 385 aaPredicted RBP9□□□□□ -0.97
HMGCLL1-206ENST00000428842 DGAT2L6Q6ZPD8 337 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 HMGN2P46Q86SG4 172 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 TMEM132CQ8N3T6 1108 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 ARHGEF39Q8N4T4 335 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 RGMAQ96B86 450 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 CCDC124Q96CT7 223 aaKnown RBP9□□□□□ -0.97
HMGCLL1-206ENST00000428842 ZNF501Q96CX3 271 aaPredicted RBP9□□□□□ -0.97
HMGCLL1-206ENST00000428842 TCTN2Q96GX1 697 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 CCDC28BQ9BUN5 200 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 BRF2Q9HAW0 419 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 CTSFQ9UBX1 484 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 A0A0A6YYD5 115 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 FAM221BA6H8Z2 402 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 HRKO00198 91 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 NTN3O00634 580 aaPredicted RBP9□□□□□ -0.97
HMGCLL1-206ENST00000428842 CLEC3AO75596 197 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 CPSF4O95639 269 aaKnown RBP9□□□□□ -0.97
HMGCLL1-206ENST00000428842 COX7A2P14406 83 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 IDO1P14902 403 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 CXCR2P25025 360 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 EPHA4P54764 986 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 MTPNP58546 118 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 STX1BP61266 288 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 LAPTM5Q13571 262 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 ADPRMQ3LIE5 342 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 C1orf146Q5VVC0 180 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 OR52E8Q6IFG1 317 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 TRIM40Q6P9F5 258 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 TRPV3Q8NET8 790 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 PUM2Q8TB72 1066 aaKnown RBP eCLIP9□□□□□ -0.97
HMGCLL1-206ENST00000428842 REPS1Q96D71 796 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 SLC41A2Q96JW4 573 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 NR1H4Q96RI1 486 aaPredicted RBP9□□□□□ -0.97
HMGCLL1-206ENST00000428842 BRINP2Q9C0B6 783 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 VCXQ9H320 206 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 UCK1Q9HA47 277 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 CLCA2Q9UQC9 943 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 EIF3LQ9Y262 564 aaKnown RBP9□□□□□ -0.97
HMGCLL1-206ENST00000428842 HCN4Q9Y3Q4 1203 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 ASB4Q9Y574 426 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 B3GALT1Q9Y5Z6 326 aa9□□□□□ -0.97
HMGCLL1-206ENST00000428842 MAGEA13PA6NCF6 341 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 ZSCAN9O15535 394 aaPredicted RBP8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 CCNDBP1O95273 360 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 PGRP06401 933 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 ALOX12P18054 663 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 AHRP35869 848 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 LIM2P55344 173 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 WNT3P56703 355 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 ZNF763Q0D2J5 394 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 HSPB3Q12988 150 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 CYLC2Q14093 348 aaPredicted RBP8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 SQLEQ14534 574 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 MMEL1Q495T6 779 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 MFSD4BQ5TF39 518 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 HES3Q5TGS1 186 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 REP15Q6BDI9 236 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 BLOC1S3Q6QNY0 202 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 SZRD1Q7Z422 152 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 RIMKLAQ8IXN7 391 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 D2HGDHQ8N465 521 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 NAT6Q93015 286 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 KCNC2Q96PR1 638 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 OR52E6Q96RD3 313 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 ZNF768Q9H5H4 540 aaKnown RBP8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 S100A14Q9HCY8 104 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 SLC22A11Q9NSA0 550 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 NDE1Q9NXR1 346 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 VAPAQ9P0L0 249 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 EPHA6Q9UF33 1036 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 PISDQ9UG56 409 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 VPS4AQ9UN37 437 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 IGHV3-20A0A0C4DH32 117 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 ACP1P24666 158 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 RNF144AP50876 292 aaPredicted RBP8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 IFNEQ86WN2 208 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 CCDC116Q8IYX3 515 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 DEFB107AQ8IZN7 70 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 CPSF7Q8N684 471 aaKnown RBP8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 HIPK4Q8NE63 616 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 OR4D9Q8NGE8 314 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 OR10Q1Q8NGQ4 319 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms