RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 FAM20BO75063 409 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 RASGRP1O95267 797 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 CH25HO95992 272 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 HPRP00739 348 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 CTSBP07858 339 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 RETP07949 1114 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 SLC35G4P0C7Q5 338 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 NPIPA8P0DM63 369 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 OR12D1P0DN82 309 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 TYRP1P17643 537 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 TIA1P31483 386 aaKnown RBP eCLIP7.98□□□□□ -1.13
CD44-208ENST00000428726 RCVRNP35243 200 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 PPP1CAP62136 330 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 DUSP2Q05923 314 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 MAP4K2Q12851 820 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 PIN1Q13526 163 aaPredicted RBP7.98□□□□□ -1.13
CD44-208ENST00000428726 MLF2Q15773 248 aaPredicted RBP7.98□□□□□ -1.13
CD44-208ENST00000428726 CST6Q15828 149 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 EXOC3L2Q2M3D2 409 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 C6orf141Q5SZD1 244 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 MSANTD1Q6ZTZ1 278 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 ZNF438Q7Z4V0 828 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 P3H2Q8IVL5 708 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 ADHFE1Q8IWW8 467 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 ETFBKMTQ8IXQ9 262 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 ZFP90Q8TF47 636 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 HMGB4Q8WW32 186 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 HPS1Q92902 700 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 COQ10AQ96MF6 247 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 RDH12Q96NR8 316 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 FUNDC2Q9BWH2 189 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 OSBPL10Q9BXB5 764 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 TCEAL2Q9H3H9 227 aaPredicted RBP7.98□□□□□ -1.13
CD44-208ENST00000428726 REEP1Q9H902 201 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 GPR83Q9NYM4 423 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 NFKBIL1Q9UBC1 381 aaPredicted RBP7.98□□□□□ -1.13
CD44-208ENST00000428726 KLHL3Q9UH77 587 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 RUVBL1Q9Y265 456 aaKnown RBP7.98□□□□□ -1.13
CD44-208ENST00000428726 KCNE3Q9Y6H6 103 aa7.98□□□□□ -1.13
CD44-208ENST00000428726 SOBPA7XYQ1 873 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 NDUFS4O43181 175 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 ERI3O43414 337 aaKnown RBP7.97□□□□□ -1.13
CD44-208ENST00000428726 KLHL18O94889 574 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 NFATC1O95644 943 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 MT-ND2P03891 347 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 CELA2BP08218 269 aaPredicted RBP7.97□□□□□ -1.13
CD44-208ENST00000428726 CKMT1AP12532 417 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 TNNI3P19429 210 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 COL9A1P20849 921 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 HTR1BP28222 390 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 SSR2P43308 183 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 MAPK9P45984 424 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 HNRNPFP52597 415 aaKnown RBP7.97□□□□□ -1.13
CD44-208ENST00000428726 RPP38P78345 283 aaKnown RBP7.97□□□□□ -1.13
CD44-208ENST00000428726 RELAQ04206 551 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 EPS8Q12929 822 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 SCARB2Q14108 478 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 LASP1Q14847 261 aaKnown RBP7.97□□□□□ -1.13
CD44-208ENST00000428726 PDGFRLQ15198 375 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 SKIV2LQ15477 1246 aaKnown RBP7.97□□□□□ -1.13
CD44-208ENST00000428726 NNATQ16517 81 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 LIPJQ5W064 366 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 PNCKQ6P2M8 343 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 RTL10Q7L3V2 364 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 GPR149Q86SP6 731 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 C17orf64Q86WR6 236 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 LACC1Q8IV20 430 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 HORMAD2Q8N7B1 307 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 CSGALNACT1Q8TDX6 532 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 TAMM41Q96BW9 452 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 FAM83CQ9BQN1 747 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 MAGIXQ9H6Y5 334 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 FGF22Q9HCT0 170 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 DMRT3Q9NQL9 472 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 ORC6Q9Y5N6 252 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 TSPAN11A1L157 253 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 SLC35F4A4IF30 521 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 PCDHGA12O60330 932 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 B4GALT2O60909 372 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 LILRB5O75023 590 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 TBX6O95947 436 aaPredicted RBP7.97□□□□□ -1.13
CD44-208ENST00000428726 TGM4P49221 684 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 GZMMP51124 257 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 FOXL2P58012 376 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 NPTX1Q15818 432 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 C6orf183Q5T699 404 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 PIP5KL1Q5T9C9 394 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 NXPE4Q6UWF7 544 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 KIAA0907Q7Z7F0 614 aaPredicted RBP7.97□□□□□ -1.13
CD44-208ENST00000428726 SLCO6A1Q86UG4 719 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 COMTD1Q86VU5 262 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 CALHM3Q86XJ0 350 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 RASGRP3Q8IV61 690 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 SPARTQ8N0X7 666 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 SVOPLQ8N434 492 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 ZNF614Q8N883 585 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 ATL1Q8WXF7 558 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 TP53INP1Q96A56 240 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 OTUB2Q96DC9 234 aa7.97□□□□□ -1.13
CD44-208ENST00000428726 COX4I2Q96KJ9 171 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms