RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 C14orf166Q9Y224 244 aaKnown RBP13.95□□□□□ -0.18
PTPRU-204ENST00000428026 RBM47A0AV96 593 aaKnown RBP13.95□□□□□ -0.18
PTPRU-204ENST00000428026 GRXCR1A8MXD5 290 aa13.95□□□□□ -0.18
PTPRU-204ENST00000428026 WNT9AO14904 365 aa13.95□□□□□ -0.18
PTPRU-204ENST00000428026 INPPL1O15357 1258 aa13.95□□□□□ -0.18
PTPRU-204ENST00000428026 RPL10P27635 214 aaKnown RBP13.95□□□□□ -0.18
PTPRU-204ENST00000428026 RPL35P42766 123 aaKnown RBP13.95□□□□□ -0.18
PTPRU-204ENST00000428026 GALNT2Q10471 571 aa13.95□□□□□ -0.18
PTPRU-204ENST00000428026 SLC36A3Q495N2 470 aa13.95□□□□□ -0.18
PTPRU-204ENST00000428026 ENPP6Q6UWR7 440 aa13.95□□□□□ -0.18
PTPRU-204ENST00000428026 DPH2Q9BQC3 489 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-204ENST00000428026 SCP2D1Q9UJQ7 156 aa13.95□□□□□ -0.18
PTPRU-204ENST00000428026 ERVW-1Q9UQF0 538 aa13.95□□□□□ -0.18
PTPRU-204ENST00000428026 SLC1A7O00341 560 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 KCNE1P15382 129 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 LINC00471Q8N535 108 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 JPH3Q8WXH2 748 aaPredicted RBP13.94□□□□□ -0.18
PTPRU-204ENST00000428026 TMEM41AQ96HV5 264 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 GPR88Q9GZN0 384 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 DLGAP4Q9Y2H0 992 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 PCDH17O14917 1159 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 OXSR1O95747 527 aaPredicted RBP13.94□□□□□ -0.18
PTPRU-204ENST00000428026 H2AFB2P0C5Z0 115 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 PVALBP20472 110 aaPredicted RBP13.94□□□□□ -0.18
PTPRU-204ENST00000428026 CCKBRP32239 447 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 SPATS1Q496A3 300 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 PEX13Q92968 403 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 RGPD1P0DJD0 1748 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 CNTN5O94779 1100 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 GALTP07902 379 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 HCKP08631 526 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 ALPPL2P10696 532 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 C10orf62Q5T681 223 aaPredicted RBP13.94□□□□□ -0.18
PTPRU-204ENST00000428026 UBE2UQ5VVX9 321 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 AGTRAPQ6RW13 159 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 FBXL18Q96ME1 805 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 SPATA9Q9BWV2 254 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 TBL1XR1Q9BZK7 514 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 GPR83Q9NYM4 423 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 REEP3Q6NUK4 255 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 PIWIL3Q7Z3Z3 882 aaKnown RBP13.94□□□□□ -0.18
PTPRU-204ENST00000428026 IGSF21Q96ID5 467 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 ZNF599Q96NL3 588 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 ZNF649Q9BS31 505 aa13.94□□□□□ -0.18
PTPRU-204ENST00000428026 CSTBP04080 98 aaKnown RBP13.93□□□□□ -0.18
PTPRU-204ENST00000428026 OPRL1P41146 370 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 CEACAM19Q7Z692 300 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 CCM2Q9BSQ5 444 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 CCDC86Q9H6F5 360 aaKnown RBP13.93□□□□□ -0.18
PTPRU-204ENST00000428026 NUP98P52948 1817 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 MITFO75030 526 aaPredicted RBP13.93□□□□□ -0.18
PTPRU-204ENST00000428026 SOD2P04179 222 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 SFTPBP07988 381 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 HTR1EP28566 365 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 GALNT10Q86SR1 603 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 COMMD7Q86VX2 200 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 BCO2Q9BYV7 579 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 PCDHB14Q9Y5E9 798 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 FARS2O95363 451 aaKnown RBP13.93□□□□□ -0.18
PTPRU-204ENST00000428026 DNAJB1P25685 340 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 CLCNKAP51800 687 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 AADACL4Q5VUY2 407 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 ABHD11Q8NFV4 315 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 OR8J3Q8NGG0 315 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 NRG4Q8WWG1 115 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 DEDD2Q8WXF8 326 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 SLC6A7Q99884 636 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 POT1Q9NUX5 634 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 A6NHS1 94 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 HPRP00739 348 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 CTSOP43234 321 aaPredicted RBP13.93□□□□□ -0.18
PTPRU-204ENST00000428026 TECRLQ5HYJ1 363 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 GDPD4Q6W3E5 623 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 CARM1Q86X55 608 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 ZNF461Q8TAF7 563 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 NDNFQ8TB73 568 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 FANK1Q8TC84 345 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 DENND1AQ8TEH3 1009 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 SECISBP2Q96T21 854 aaKnown RBP13.93□□□□□ -0.18
PTPRU-204ENST00000428026 MEAF6Q9HAF1 191 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 ZNF226Q9NYT6 803 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 GOLGA4Q13439 2230 aaKnown RBP13.93□□□□□ -0.18
PTPRU-204ENST00000428026 MSL3P1P0C860 447 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 ACVR1BP36896 505 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 PREPP48147 710 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 NTRK2Q16620 822 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 COL28A1Q2UY09 1125 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 OSTM1Q86WC4 334 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 MFSD8Q8NHS3 518 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 CYB5D2Q8WUJ1 264 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 OSTF1Q92882 214 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 TCEAL4Q96EI5 215 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 P2RY13Q9BPV8 354 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 HDHD5Q9BXW7 423 aa13.93□□□□□ -0.18
PTPRU-204ENST00000428026 TAS2R43P59537 309 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 RELAQ04206 551 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 NPRL3Q12980 569 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 MCHR1Q99705 422 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 WDR6Q9NNW5 1121 aaKnown RBP13.92□□□□□ -0.18
PTPRU-204ENST00000428026 KLF15Q9UIH9 416 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms