RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 FMO2Q99518 471 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 CCDC77Q9BR77 488 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 LIN28AQ9H9Z2 209 aaKnown RBP17.15■□□□□ 0.34
PSPC1-202ENST00000427943 LYRM4Q9HD34 91 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 NPIPA1Q9UND3 350 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 PPIEQ9UNP9 301 aaKnown RBP17.15■□□□□ 0.34
PSPC1-202ENST00000427943 CELSR2Q9HCU4 2923 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 NCOA6Q14686 2063 aaPredicted RBP17.14■□□□□ 0.33
PSPC1-202ENST00000427943 CCL21O00585 134 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 CTNSO60931 367 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 SIX3O95343 332 aaPredicted RBP17.14■□□□□ 0.33
PSPC1-202ENST00000427943 INHBAP08476 426 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 TRHRP34981 398 aaPredicted RBP17.14■□□□□ 0.33
PSPC1-202ENST00000427943 CA7P43166 264 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 GPR143P51810 404 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 ALDH18A1P54886 795 aaKnown RBP17.14■□□□□ 0.33
PSPC1-202ENST00000427943 PCDH1Q08174 1060 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 STX4Q12846 297 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 ELAVL1Q15717 326 aaKnown RBP17.14■□□□□ 0.33
PSPC1-202ENST00000427943 AP5B1Q2VPB7 878 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 TMEM35AQ53FP2 167 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 TECRLQ5HYJ1 363 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 KHDRBS2Q5VWX1 349 aaKnown RBP17.14■□□□□ 0.33
PSPC1-202ENST00000427943 CEP128Q6ZU80 1094 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 CHSY3Q70JA7 882 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 GOLGA7Q7Z5G4 137 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 RELL1Q8IUW5 271 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 PLD6Q8N2A8 252 aaKnown RBP17.14■□□□□ 0.33
PSPC1-202ENST00000427943 HUS1BQ8NHY5 278 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 UHMK1Q8TAS1 419 aaKnown RBP17.14■□□□□ 0.33
PSPC1-202ENST00000427943 MAGED4Q96JG8 741 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 MTERF1Q99551 399 aaKnown RBP17.14■□□□□ 0.33
PSPC1-202ENST00000427943 ALOXE3Q9BYJ1 711 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 TRIM45Q9H8W5 580 aaPredicted RBP17.14■□□□□ 0.33
PSPC1-202ENST00000427943 ACTR8Q9H981 624 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 DMRT3Q9NQL9 472 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 ZNF358Q9NW07 568 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 PCNX1Q96RV3 2341 aa17.14■□□□□ 0.33
PSPC1-202ENST00000427943 ZNHIT1O43257 154 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 KLK8O60259 260 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 SLC19A2O60779 497 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 SCELO95171 688 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 MLYCDO95822 493 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 ZNF24P17028 368 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 CPN2P22792 545 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 ECHS1P30084 290 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 SERPINB1P30740 379 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 RAP1GDS1P52306 607 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 GTF2H2Q13888 395 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 C3AR1Q16581 482 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 RNFT1Q5M7Z0 435 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 DEPDC1Q5TB30 811 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 GTF2H2CQ6P1K8 395 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 SIAH3Q8IW03 269 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 CYP4Z2PQ8N1L4 340 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 TMEM132CQ8N3T6 1108 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 TMEM156Q8N614 296 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 ZNF321PQ8N8H1 164 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 SLC44A1Q8WWI5 657 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 CCDC120Q96HB5 630 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 PAFAH2Q99487 392 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 FUT8Q9BYC5 575 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 SUCOQ9UBS9 1254 aaKnown RBP17.13■□□□□ 0.33
PSPC1-202ENST00000427943 TINAGQ9UJW2 476 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 CLCA3PQ9Y6N3 262 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 SPACA6W5XKT8 324 aa17.13■□□□□ 0.33
PSPC1-202ENST00000427943 POC1B-GALNT4F8VUJ3 575 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 PLPP1O14494 284 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 CDK2AP1O14519 115 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 ZFAND5O76080 213 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 CTAGE8P0CG41 777 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 RFC3P40938 356 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 MEOX1P50221 254 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 SSR4P51571 173 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 RPS13P62277 151 aaKnown RBP17.12■□□□□ 0.33
PSPC1-202ENST00000427943 HSF1Q00613 529 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 SLAMF1Q13291 335 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 PCBP2Q15366 365 aaKnown RBP eCLIP17.12■□□□□ 0.33
PSPC1-202ENST00000427943 LIPJQ5W064 366 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 OR4C11Q6IEV9 310 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 CTAGE4Q8IX94 777 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 PTGR2Q8N8N7 351 aaPredicted RBP17.12■□□□□ 0.33
PSPC1-202ENST00000427943 MNS1Q8NEH6 495 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 PTPMT1Q8WUK0 201 aaPredicted RBP17.12■□□□□ 0.33
PSPC1-202ENST00000427943 DAZLQ92904 295 aaKnown RBP17.12■□□□□ 0.33
PSPC1-202ENST00000427943 OR8D2Q9GZM6 311 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 IPPKQ9H8X2 491 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 VTI1BQ9UEU0 232 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 KLF13Q9Y2Y9 288 aaPredicted RBP17.12■□□□□ 0.33
PSPC1-202ENST00000427943 ITPR2Q14571 2701 aa17.12■□□□□ 0.33
PSPC1-202ENST00000427943 CCDC189A1A4V9 331 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 SYNDIG1LA6NDD5 238 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 TMEM200CA6NKL6 621 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 WWP2O00308 870 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 FGF17O60258 216 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 PRKRAO75569 313 aaKnown RBP17.11■□□□□ 0.33
PSPC1-202ENST00000427943 OR2J2O76002 312 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 TNNI3P19429 210 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 ARL1P40616 181 aaPredicted RBP17.11■□□□□ 0.33
PSPC1-202ENST00000427943 PIK3CBP42338 1070 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms