RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 PPP6CO00743 305 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 UBE2CO00762 179 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 GABRDO14764 452 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 PLA2G10O15496 165 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 NUPL2O15504 423 aaKnown RBP5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC7A4O43246 635 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 PCDHGA12O60330 932 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 ATP6AP2O75787 350 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 ATG12O94817 140 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 CDRT1O95170 752 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 PGK1P00558 417 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 RLN2P04090 185 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 HLA-DPB1P04440 258 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 FCER2P06734 321 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 HIST1H2AGP0C0S8 130 aaPredicted RBP5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 HIST1H2ADP20671 130 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 OGNP20774 298 aaKnown RBP5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 ACADLP28330 430 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 GABRA5P31644 462 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 AVPR1AP37288 418 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 CSKP41240 450 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 PREPP48147 710 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 DAPP51397 102 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 CLCN4P51793 760 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 CAPZA1P52907 286 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 TAS2R39P59534 338 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 TAS2R60P59551 318 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 UBE2IP63279 158 aaKnown RBP5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 RPL6Q02878 288 aaKnown RBP5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 TAP2Q03519 686 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC3A1Q07837 685 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 CLN3Q13286 438 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 IRF5Q13568 498 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 DYRK1AQ13627 763 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 VEZF1Q14119 521 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 ERV3-1Q14264 604 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 FCN2Q15485 313 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 TRAM1Q15629 374 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 HMGN3Q15651 99 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 GPR68Q15743 365 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 NTRK2Q16620 822 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 CDO1Q16878 200 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 UAP1L1Q3KQV9 507 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 FLYWCH1Q4VC44 716 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 PYCR3Q53H96 274 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 IDNKQ5T6J7 187 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 MANEALQ5VSG8 457 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 KCTD11Q693B1 232 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 CLEC6AQ6EIG7 209 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 HIST2H2AA3Q6FI13 130 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 KIAA1161Q6NSJ0 714 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 ENPP6Q6UWR7 440 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 DLEU7Q6UYE1 221 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF730Q6ZMV8 503 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 GCNT7Q6ZNI0 430 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 USP53Q70EK8 1073 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 TMPRSS9Q7Z410 1059 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 OAFQ86UD1 273 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 TXNRD3Q86VQ6 643 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 CYP4Z1Q86W10 505 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 ATCAYQ86WG3 371 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 NT5DC4Q86YG4 428 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 PHYKPLQ8IUZ5 450 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZBTB8OSQ8IWT0 167 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC30A8Q8IWU4 369 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 SYNE4Q8N205 404 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 FBXO39Q8N4B4 442 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 WDTC1Q8N5D0 677 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 NKAPQ8N5F7 415 aaKnown RBP5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 C15orf54Q8N8G6 183 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 PTGR2Q8N8N7 351 aaPredicted RBP5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 TMEM145Q8NBT3 493 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 FAM46DQ8NEK8 389 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 GPR156Q8NFN8 814 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 PXT1Q8NFP0 134 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 BEST4Q8NFU0 473 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 NLGN2Q8NFZ4 835 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR52K2Q8NGK3 314 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR5J2Q8NH18 312 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 MOSPD2Q8NHP6 518 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 ASZ1Q8WWH4 475 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 SELENOMQ8WWX9 145 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 DDX17Q92841 729 aaKnown RBP5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 DNASE1L2Q92874 299 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 PHF21BQ96EK2 531 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 HIST1H2AHQ96KK5 128 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 TBATAQ96M53 351 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 PPM1MQ96MI6 270 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 SFXN2Q96NB2 322 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 TMEM74Q96NL1 305 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 C8orf37Q96NL8 207 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 PEBP4Q96S96 227 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF382Q96SR6 550 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 MTERF1Q99551 399 aaKnown RBP5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 ELF4Q99607 663 aaPredicted RBP5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 HIST1H2AJQ99878 128 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 TBL1YQ9BQ87 522 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 FSD1LQ9BXM9 530 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 TEX12Q9BXU0 123 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 CEP41Q9BYV8 373 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms