RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 CXCR4P61073 352 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 SELENOWP63302 87 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 NFE2L1Q14494 772 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 ZNF846Q147U1 533 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 TEAD4Q15561 434 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 BCL2A1Q16548 175 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 PROX2Q3B8N5 592 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 PAGE2BQ5JRK9 111 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 TMEM31Q5JXX7 168 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 PIAS4Q8N2W9 510 aaPredicted RBP10.19□□□□□ -0.78
CUX1-205ENST00000425244 SLC5A11Q8WWX8 675 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 TAMM41Q96BW9 452 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 YIPF6Q96EC8 236 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 ZNF347Q96SE7 839 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 COPS4Q9BT78 406 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 SPATA9Q9BWV2 254 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 CCNB1IP1Q9NPC3 277 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 ATAD3AQ9NVI7 634 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 DKK3Q9UBP4 350 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 CA14Q9ULX7 337 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 ERGIC3Q9Y282 383 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 PCDHGB1Q9Y5G3 927 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 PCDHGA6Q9Y5G7 932 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 LYVE1Q9Y5Y7 322 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 TMEM229AB2RXF0 380 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 J3KTA2 159 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 SPINT1O43278 529 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 C6P13671 934 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 CD36P16671 472 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 C21orf33P30042 268 aaPredicted RBP10.19□□□□□ -0.78
CUX1-205ENST00000425244 CYP4F2P78329 520 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 EXOC3L2Q2M3D2 409 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 TRIM16LQ309B1 348 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 IFI44LQ53G44 452 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 SYT6Q5T7P8 510 aaPredicted RBP10.19□□□□□ -0.78
CUX1-205ENST00000425244 TSEN54Q7Z6J9 526 aaKnown RBP10.19□□□□□ -0.78
CUX1-205ENST00000425244 PLD3Q8IV08 490 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 PEX5LQ8IYB4 626 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 LGI4Q8N135 537 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 ANKK1Q8NFD2 765 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 OR9A1PQ8NGU1 263 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 C16orf78Q8WTQ4 265 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 NUS1Q96E22 293 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 METTL2AQ96IZ6 378 aaKnown RBP10.19□□□□□ -0.78
CUX1-205ENST00000425244 NRTNQ99748 197 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 EFCAB11Q9BUY7 163 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 BHLHE41Q9C0J9 482 aaPredicted RBP10.19□□□□□ -0.78
CUX1-205ENST00000425244 HMG20AQ9NP66 347 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 PALMDQ9NP74 551 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 CCDC177Q9NQR7 707 aaPredicted RBP10.19□□□□□ -0.78
CUX1-205ENST00000425244 RABL2AQ9UBK7 228 aaPredicted RBP10.19□□□□□ -0.78
CUX1-205ENST00000425244 DAPK2Q9UIK4 370 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 RAB23Q9ULC3 237 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 PADI2Q9Y2J8 665 aa10.19□□□□□ -0.78
CUX1-205ENST00000425244 PCM1Q15154 2024 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 ADAMDEC1O15204 470 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 ADAM23O75077 832 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 POP7O75817 140 aaKnown RBP10.18□□□□□ -0.78
CUX1-205ENST00000425244 SOD1P00441 154 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 IL3P08700 152 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 FURINP09958 794 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 COL9A1P20849 921 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 MAT2AP31153 395 aaKnown RBP10.18□□□□□ -0.78
CUX1-205ENST00000425244 DRD3P35462 400 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 DGKEP52429 567 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 MVDP53602 400 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 TAP2Q03519 686 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 GANABQ14697 944 aaKnown RBP10.18□□□□□ -0.78
CUX1-205ENST00000425244 CYP2A13Q16696 494 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 DGUOKQ16854 277 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 SLC5A12Q1EHB4 618 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 PRSS48Q7RTY5 328 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 CAMKMTQ7Z624 323 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 SLC44A2Q8IWA5 706 aaPredicted RBP10.18□□□□□ -0.78
CUX1-205ENST00000425244 OR9Q2Q8NGE9 314 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 CHPT1Q8WUD6 406 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 FAM3CQ92520 227 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 ZCCHC2Q9C0B9 1178 aaKnown RBP10.18□□□□□ -0.78
CUX1-205ENST00000425244 CD93Q9NPY3 652 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 MIEF1Q9NQG6 463 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 FBXL12Q9NXK8 326 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 NFKBIL1Q9UBC1 381 aaPredicted RBP10.18□□□□□ -0.78
CUX1-205ENST00000425244 RHCGQ9UBD6 479 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 ATP6V1HQ9UI12 483 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 MAPRE3Q9UPY8 281 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 ASF1AQ9Y294 204 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 MUC22E2RYF6 1773 aaPredicted RBP10.18□□□□□ -0.78
CUX1-205ENST00000425244 TNFRSF21O75509 655 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 SULT1C4O75897 302 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 TPPPO94811 219 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 NAT2P11245 290 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 TNFRSF4P43489 277 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 SERPINB10P48595 397 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 CLK1P49759 484 aaKnown RBP10.18□□□□□ -0.78
CUX1-205ENST00000425244 VASPP50552 380 aaPredicted RBP10.18□□□□□ -0.78
CUX1-205ENST00000425244 RPS26P62854 115 aaKnown RBP10.18□□□□□ -0.78
CUX1-205ENST00000425244 CDK6Q00534 326 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 CAMK2BQ13554 666 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 PRSS53Q2L4Q9 553 aa10.18□□□□□ -0.78
CUX1-205ENST00000425244 MPEG1Q2M385 716 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms