RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 SIX3O95343 332 aaPredicted RBP20.07■□□□□ 0.8
CDCP1-202ENST00000425231 COL8A1P27658 744 aa20.07■□□□□ 0.8
CDCP1-202ENST00000425231 PER3P56645 1201 aa20.07■□□□□ 0.8
CDCP1-202ENST00000425231 GTF2H2Q13888 395 aa20.07■□□□□ 0.8
CDCP1-202ENST00000425231 ELAVL1Q15717 326 aaKnown RBP20.07■□□□□ 0.8
CDCP1-202ENST00000425231 MAPKAPK3Q16644 382 aa20.07■□□□□ 0.8
CDCP1-202ENST00000425231 OR4C11Q6IEV9 310 aa20.07■□□□□ 0.8
CDCP1-202ENST00000425231 GTF2H2CQ6P1K8 395 aa20.07■□□□□ 0.8
CDCP1-202ENST00000425231 GOLGA7Q7Z5G4 137 aa20.07■□□□□ 0.8
CDCP1-202ENST00000425231 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.07■□□□□ 0.8
CDCP1-202ENST00000425231 PTPMT1Q8WUK0 201 aaPredicted RBP20.07■□□□□ 0.8
CDCP1-202ENST00000425231 SORBS1Q9BX66 1292 aaKnown RBP20.07■□□□□ 0.8
CDCP1-202ENST00000425231 ALOXE3Q9BYJ1 711 aa20.07■□□□□ 0.8
CDCP1-202ENST00000425231 IPPKQ9H8X2 491 aa20.07■□□□□ 0.8
CDCP1-202ENST00000425231 ACTR8Q9H981 624 aa20.07■□□□□ 0.8
CDCP1-202ENST00000425231 DMRT3Q9NQL9 472 aa20.07■□□□□ 0.8
CDCP1-202ENST00000425231 CPSF2Q9P2I0 782 aaKnown RBP20.07■□□□□ 0.8
CDCP1-202ENST00000425231 PCDHGA11Q9Y5H2 935 aa20.07■□□□□ 0.8
CDCP1-202ENST00000425231 TNPO3Q9Y5L0 923 aaKnown RBP20.07■□□□□ 0.8
CDCP1-202ENST00000425231 SYNDIG1LA6NDD5 238 aa20.06■□□□□ 0.8
CDCP1-202ENST00000425231 TMEM200CA6NKL6 621 aa20.06■□□□□ 0.8
CDCP1-202ENST00000425231 H0YIV9 168 aa20.06■□□□□ 0.8
CDCP1-202ENST00000425231 FCHO1O14526 889 aa20.06■□□□□ 0.8
CDCP1-202ENST00000425231 PRKNO60260 465 aaPredicted RBP20.06■□□□□ 0.8
CDCP1-202ENST00000425231 NME2P1O60361 137 aa20.06■□□□□ 0.8
CDCP1-202ENST00000425231 UGDHO60701 494 aa20.06■□□□□ 0.8
CDCP1-202ENST00000425231 LDB3O75112 727 aa20.06■□□□□ 0.8
CDCP1-202ENST00000425231 NME2P22392 152 aa20.06■□□□□ 0.8
CDCP1-202ENST00000425231 SERPINB9P50453 376 aa20.06■□□□□ 0.8
CDCP1-202ENST00000425231 DDX39BQ13838 428 aaKnown RBP20.06■□□□□ 0.8
CDCP1-202ENST00000425231 METTL2BQ6P1Q9 378 aaKnown RBP20.06■□□□□ 0.8
CDCP1-202ENST00000425231 MYLK4Q86YV6 388 aaPredicted RBP20.06■□□□□ 0.8
CDCP1-202ENST00000425231 TMEM132CQ8N3T6 1108 aa20.06■□□□□ 0.8
CDCP1-202ENST00000425231 DCAKDQ8WVC6 231 aa20.06■□□□□ 0.8
CDCP1-202ENST00000425231 MTERF1Q99551 399 aaKnown RBP20.06■□□□□ 0.8
CDCP1-202ENST00000425231 ZNF180Q9UJW8 692 aa20.06■□□□□ 0.8
CDCP1-202ENST00000425231 FBXW2Q9UKT8 454 aa20.06■□□□□ 0.8
CDCP1-202ENST00000425231 UNC79Q9P2D8 2635 aa20.06■□□□□ 0.8
CDCP1-202ENST00000425231 POC1B-GALNT4F8VUJ3 575 aa20.05■□□□□ 0.8
CDCP1-202ENST00000425231 KIF2AO00139 706 aaPredicted RBP20.05■□□□□ 0.8
CDCP1-202ENST00000425231 ZG16O60844 167 aa20.05■□□□□ 0.8
CDCP1-202ENST00000425231 ITGA10O75578 1167 aa20.05■□□□□ 0.8
CDCP1-202ENST00000425231 IFNA16P05015 189 aa20.05■□□□□ 0.8
CDCP1-202ENST00000425231 SSR2P43308 183 aa20.05■□□□□ 0.8
CDCP1-202ENST00000425231 STX4Q12846 297 aa20.05■□□□□ 0.8
CDCP1-202ENST00000425231 SLAMF1Q13291 335 aa20.05■□□□□ 0.8
CDCP1-202ENST00000425231 ZRSR2Q15696 482 aaKnown RBP20.05■□□□□ 0.8
CDCP1-202ENST00000425231 MYO7BQ6PIF6 2116 aa20.05■□□□□ 0.8
CDCP1-202ENST00000425231 L3MBTL4Q8NA19 623 aa20.05■□□□□ 0.8
CDCP1-202ENST00000425231 UHMK1Q8TAS1 419 aaKnown RBP20.05■□□□□ 0.8
CDCP1-202ENST00000425231 RGMAQ96B86 450 aa20.05■□□□□ 0.8
CDCP1-202ENST00000425231 ANKRD9Q96BM1 317 aaPredicted RBP20.05■□□□□ 0.8
CDCP1-202ENST00000425231 GPR137Q96N19 417 aa20.05■□□□□ 0.8
CDCP1-202ENST00000425231 PRM3Q9NNZ6 103 aa20.05■□□□□ 0.8
CDCP1-202ENST00000425231 RNF11Q9Y3C5 154 aa20.05■□□□□ 0.8
CDCP1-202ENST00000425231 IKBKGQ9Y6K9 419 aa20.05■□□□□ 0.8
CDCP1-202ENST00000425231 CLCA3PQ9Y6N3 262 aa20.05■□□□□ 0.8
CDCP1-202ENST00000425231 CRYBG3Q68DQ2 2970 aa20.04■□□□□ 0.8
CDCP1-202ENST00000425231 PLPP1O14494 284 aa20.04■□□□□ 0.8
CDCP1-202ENST00000425231 KRT38O76015 456 aa20.04■□□□□ 0.8
CDCP1-202ENST00000425231 ZFAND5O76080 213 aa20.04■□□□□ 0.8
CDCP1-202ENST00000425231 RBP1P09455 135 aa20.04■□□□□ 0.8
CDCP1-202ENST00000425231 RPS13P62277 151 aaKnown RBP20.04■□□□□ 0.8
CDCP1-202ENST00000425231 ALDH6A1Q02252 535 aaKnown RBP20.04■□□□□ 0.8
CDCP1-202ENST00000425231 SERTAD2Q14140 314 aa20.04■□□□□ 0.8
CDCP1-202ENST00000425231 CPSF6Q16630 551 aaKnown RBP eCLIP20.04■□□□□ 0.8
CDCP1-202ENST00000425231 KRTCAP3Q53RY4 240 aa20.04■□□□□ 0.8
CDCP1-202ENST00000425231 SIAH3Q8IW03 269 aa20.04■□□□□ 0.8
CDCP1-202ENST00000425231 PTGR2Q8N8N7 351 aaPredicted RBP20.04■□□□□ 0.8
CDCP1-202ENST00000425231 FAM98AQ8NCA5 519 aaKnown RBP20.04■□□□□ 0.8
CDCP1-202ENST00000425231 MORN4Q8NDC4 146 aa20.04■□□□□ 0.8
CDCP1-202ENST00000425231 KIF18AQ8NI77 898 aa20.04■□□□□ 0.8
CDCP1-202ENST00000425231 WDR20Q8TBZ3 569 aa20.04■□□□□ 0.8
CDCP1-202ENST00000425231 DAZLQ92904 295 aaKnown RBP20.04■□□□□ 0.8
CDCP1-202ENST00000425231 ZNF717Q9BY31 904 aaPredicted RBP20.04■□□□□ 0.8
CDCP1-202ENST00000425231 SPACA6W5XKT8 324 aa20.04■□□□□ 0.8
CDCP1-202ENST00000425231 A0A087WUV0 522 aaPredicted RBP20.03■□□□□ 0.8
CDCP1-202ENST00000425231 OR7A17O14581 309 aa20.03■□□□□ 0.8
CDCP1-202ENST00000425231 COL6A2P12110 1019 aa20.03■□□□□ 0.8
CDCP1-202ENST00000425231 CPN2P22792 545 aa20.03■□□□□ 0.8
CDCP1-202ENST00000425231 PTX3P26022 381 aaPredicted RBP20.03■□□□□ 0.8
CDCP1-202ENST00000425231 CNTFP26441 200 aa20.03■□□□□ 0.8
CDCP1-202ENST00000425231 PIK3CGP48736 1102 aa20.03■□□□□ 0.8
CDCP1-202ENST00000425231 ARFIP1P53367 373 aa20.03■□□□□ 0.8
CDCP1-202ENST00000425231 ID2Q02363 134 aa20.03■□□□□ 0.8
CDCP1-202ENST00000425231 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.03■□□□□ 0.8
CDCP1-202ENST00000425231 RNFT1Q5M7Z0 435 aa20.03■□□□□ 0.8
CDCP1-202ENST00000425231 C16orf47Q6ZP98 133 aaPredicted RBP20.03■□□□□ 0.8
CDCP1-202ENST00000425231 TAOK1Q7L7X3 1001 aa20.03■□□□□ 0.8
CDCP1-202ENST00000425231 ZCCHC7Q8N3Z6 543 aaKnown RBP20.03■□□□□ 0.8
CDCP1-202ENST00000425231 TMEM125Q96AQ2 219 aa20.03■□□□□ 0.8
CDCP1-202ENST00000425231 PHF21BQ96EK2 531 aa20.03■□□□□ 0.8
CDCP1-202ENST00000425231 CCDC77Q9BR77 488 aa20.03■□□□□ 0.8
CDCP1-202ENST00000425231 TSPAN10Q9H1Z9 355 aaPredicted RBP20.03■□□□□ 0.8
CDCP1-202ENST00000425231 LIN28AQ9H9Z2 209 aaKnown RBP20.03■□□□□ 0.8
CDCP1-202ENST00000425231 PSD3Q9NYI0 1048 aa20.03■□□□□ 0.8
CDCP1-202ENST00000425231 NFU1Q9UMS0 254 aa20.03■□□□□ 0.8
CDCP1-202ENST00000425231 YARS2Q9Y2Z4 477 aaKnown RBP20.03■□□□□ 0.8
CDCP1-202ENST00000425231 TRGV8A0A0C4DH27 118 aa20.02■□□□□ 0.8
CDCP1-202ENST00000425231 TRIM49D1C9J1S8 452 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms