RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 PEX3P56589 373 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 RWDD2BP57060 319 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 EVCP57679 992 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 RBPJQ06330 500 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 CDC37Q16543 378 aaPredicted RBP2.95□□□□□ -1.94
LINC01040-201ENST00000425048 TCEAL6Q6IPX3 200 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 OR2L5Q8NG80 312 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 SLC26A7Q8TE54 656 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 IARS2Q9NSE4 1012 aaKnown RBP2.95□□□□□ -1.94
LINC01040-201ENST00000425048 DBF4Q9UBU7 674 aaPredicted RBP2.95□□□□□ -1.94
LINC01040-201ENST00000425048 SUN2Q9UH99 717 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 MTUS2Q5JR59 1369 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 TONSLQ96HA7 1378 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 MAPK8IP3Q9UPT6 1336 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 PTPN23Q9H3S7 1636 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 PENKP01210 267 aaPredicted RBP2.94□□□□□ -1.94
LINC01040-201ENST00000425048 H2AFXP16104 143 aaPredicted RBP2.94□□□□□ -1.94
LINC01040-201ENST00000425048 CAPN3P20807 821 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 MDKP21741 143 aaPredicted RBP2.94□□□□□ -1.94
LINC01040-201ENST00000425048 TNFRSF4P43489 277 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 RPS27AP62979 156 aaKnown RBP2.94□□□□□ -1.94
LINC01040-201ENST00000425048 RBBP4Q09028 425 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 PDIA5Q14554 519 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 LETM2Q2VYF4 491 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 AP1ARQ63HQ0 302 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 C15orf52Q6ZUT6 534 aaKnown RBP2.94□□□□□ -1.94
LINC01040-201ENST00000425048 CCDC186Q7Z3E2 898 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 DRAXINQ8NBI3 349 aaPredicted RBP2.94□□□□□ -1.94
LINC01040-201ENST00000425048 GOLGA5Q8TBA6 731 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 FAM104AQ969W3 186 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 ZNF396Q96N95 335 aaPredicted RBP2.94□□□□□ -1.94
LINC01040-201ENST00000425048 SH3GL3Q99963 347 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 LZTS2Q9BRK4 669 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 SDF4Q9BRK5 362 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 HES7Q9BYE0 225 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 KLHL4Q9C0H6 718 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 LIME1Q9H400 295 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 RPF1Q9H9Y2 349 aaKnown RBP2.94□□□□□ -1.94
LINC01040-201ENST00000425048 TBC1D29Q9UFV1 150 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 ANAPC2Q9UJX6 822 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 BLOC1S6Q9UL45 172 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 PYCARDQ9ULZ3 195 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 MOKQ9UQ07 419 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 FBXO7Q9Y3I1 522 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 BRD4O60885 1362 aaPredicted RBP2.94□□□□□ -1.94
LINC01040-201ENST00000425048 PLEKHH1Q9ULM0 1364 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 TIAM1Q13009 1591 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 GCC2Q8IWJ2 1684 aa2.94□□□□□ -1.94
LINC01040-201ENST00000425048 KIF7Q2M1P5 1343 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 FAM135AQ9P2D6 1515 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 PLXNC1O60486 1568 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 KDM5CP41229 1560 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 SCAF11Q99590 1463 aaKnown RBP2.93□□□□□ -1.94
LINC01040-201ENST00000425048 KDRP35968 1356 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 SMC2O95347 1197 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 IGHDP01880 384 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 TPM1P09493 284 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 PORP16435 677 aaPredicted RBP2.93□□□□□ -1.94
LINC01040-201ENST00000425048 PAX3P23760 479 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 CCNHP51946 323 aaPredicted RBP2.93□□□□□ -1.94
LINC01040-201ENST00000425048 MTCP1P56278 107 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 STX17P56962 302 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 GEMIN4P57678 1058 aaKnown RBP2.93□□□□□ -1.94
LINC01040-201ENST00000425048 ACSM1Q08AH1 577 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 FAM205BPQ63HN1 556 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 KRT39Q6A163 491 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 CAVIN1Q6NZI2 390 aaKnown RBP2.93□□□□□ -1.94
LINC01040-201ENST00000425048 LRRC31Q6UY01 552 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 EFCAB13Q8IY85 973 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 ZNF781Q8N8C0 355 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 Q8N9L7 120 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 XXYLT1Q8NBI6 393 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 P2RX5Q93086 422 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 BAG1Q99933 345 aaPredicted RBP2.93□□□□□ -1.94
LINC01040-201ENST00000425048 SH3GLB2Q9NR46 395 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 PHPT1Q9NRX4 125 aaPredicted RBP2.93□□□□□ -1.94
LINC01040-201ENST00000425048 CHCHD3Q9NX63 227 aaKnown RBP2.93□□□□□ -1.94
LINC01040-201ENST00000425048 EXOC6BQ9Y2D4 811 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 EPRSP07814 1512 aaKnown RBP2.93□□□□□ -1.94
LINC01040-201ENST00000425048 ZNF608Q9ULD9 1512 aaPredicted RBP2.93□□□□□ -1.94
LINC01040-201ENST00000425048 SYNRGQ9UMZ2 1314 aa2.93□□□□□ -1.94
LINC01040-201ENST00000425048 ATP10AO60312 1499 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 DENND4BO75064 1496 aaPredicted RBP2.92□□□□□ -1.94
LINC01040-201ENST00000425048 POLA1P09884 1462 aaPredicted RBP2.92□□□□□ -1.94
LINC01040-201ENST00000425048 CCDC18Q5T9S5 1454 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 TRAV18A0A075B6X5 111 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 EPOPA6NHQ4 379 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 NEBLO76041 1014 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 OR52Z1P0C646 297 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 PNMA6AP0CW24 399 aaPredicted RBP2.92□□□□□ -1.94
LINC01040-201ENST00000425048 GCFC2P16383 781 aaKnown RBP2.92□□□□□ -1.94
LINC01040-201ENST00000425048 ACTN2P35609 894 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 PRPHP41219 470 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 SLC25A1P53007 311 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 CSE1LP55060 971 aaKnown RBP2.92□□□□□ -1.94
LINC01040-201ENST00000425048 NUCB2P80303 420 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 PRKCEQ02156 737 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 CUL4AQ13619 759 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 ZNF542PQ5EBM4 170 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 MFSD4BQ5TF39 518 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms