RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 MAGEB17A8MXT2 336 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 CASKO14936 926 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 ORC5O43913 435 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 PRAMEF1O95521 474 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 IL1RNP18510 177 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 POU3F2P20265 443 aaPredicted RBP10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 LHCGRP22888 699 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 CD79BP40259 229 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 CLCNKAP51800 687 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 S100A12P80511 92 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 GRK1Q15835 563 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 ZNF792Q3KQV3 632 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 ALKAL1Q6UXT8 129 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 UNC5DQ6UXZ4 953 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 ADGRG3Q86Y34 549 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 GPRC5AQ8NFJ5 357 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 OR6M1Q8NGM8 313 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 ASB12Q8WXK4 309 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 RBPMSQ93062 196 aaKnown RBP10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 AP2M1Q96CW1 435 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 PGAP3Q96FM1 320 aaPredicted RBP10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 CRELD1Q96HD1 420 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 NFKBIZQ9BYH8 718 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 TBC1D17Q9HA65 648 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 FAM105AQ9NUU6 356 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 GMEB2Q9UKD1 530 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 ACSL6Q9UKU0 697 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 CCL15-CCL14A0A0B4J2E2 113 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 LOC285095A0A1B0GVY8 99 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 GABRR3A8MPY1 467 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 CA12O43570 354 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 KLK8O60259 260 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 GATBO75879 557 aaKnown RBP10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 PRAMEF12O95522 483 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 LAMP1P11279 417 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 PTX3P26022 381 aaPredicted RBP10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 BMP8BP34820 402 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 KIR3DL1P43629 444 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 CDC42P60953 191 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 RBBP4Q09028 425 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 FGL2Q14314 439 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 KCNA10Q16322 511 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 CCL15Q16663 113 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 KLHL22Q53GT1 634 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 COX20Q5RI15 118 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 NOTUMQ6P988 496 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 BMP8AQ7Z5Y6 402 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 HMGN2P46Q86SG4 172 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 LRRTM3Q86VH5 581 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 TCEANCQ8N8B7 351 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 OR52H1Q8NGJ2 320 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 OR5AK3PQ8NH89 298 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 SMG7Q92540 1137 aaKnown RBP10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 MYO19Q96H55 970 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 USB1Q9BQ65 265 aaKnown RBP10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 TPT1P8Q9HAU6 139 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 NKIRAS2Q9NYR9 191 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 KCMF1Q9P0J7 381 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 STUB1Q9UNE7 303 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 ING4Q9UNL4 249 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 NCKAP1Q9Y2A7 1128 aa10.8□□□□□ -0.68
SEC61A1-202ENST00000424880 TMEM229AB2RXF0 380 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 CBX4O00257 560 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 MANBAO00462 879 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 FZD6O60353 706 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 GCM2O75603 506 aaPredicted RBP10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 HOXB6P17509 224 aaKnown RBP10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 VIPR1P32241 457 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 ADCYAP1R1P41586 468 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 LSM11P83369 360 aaKnown RBP eCLIP10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 ARHGAP1Q07960 439 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 RIPPLY1Q0D2K3 151 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 MBTPS1Q14703 1052 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 ARTNQ5T4W7 220 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 ADNP2Q6IQ32 1131 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 C19orf48Q6RUI8 117 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 ATRAIDQ6UW56 229 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 LRRC17Q8N6Y2 441 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 BTN2A2Q8WVV5 523 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 TM9SF4Q92544 642 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 PDXPQ96GD0 296 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 SENP5Q96HI0 755 aaPredicted RBP10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 CXorf58Q96LI9 332 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 MTERF1Q99551 399 aaKnown RBP10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 TMED9Q9BVK6 235 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 POLMQ9NP87 494 aaPredicted RBP10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 CLN6Q9NWW5 311 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 CYB5R1Q9UHQ9 305 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 A0A1W2PQH9 124 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 HRO43593 1189 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 ACSM4P0C7M7 580 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 ETFAP13804 333 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 COX7A2P14406 83 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 OR1E1P30953 314 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 SOX18P35713 384 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 MS4A15Q8N5U1 240 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 OR8K5Q8NH50 307 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 DNAJB3Q8WWF6 145 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 PARK7Q99497 189 aaKnown RBP10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 KATNBL1Q9H079 304 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms