RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 TARDBPQ13148 414 aaKnown RBP eCLIP12.72□□□□□ -0.37
MCF2L-213ENST00000421756 RFX4Q33E94 735 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 ERICH5Q6P6B1 374 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 B3GLCTQ6Y288 498 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 ERN2Q76MJ5 926 aaKnown RBP12.72□□□□□ -0.37
MCF2L-213ENST00000421756 ADAMTS16Q8TE57 1224 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 COX4I2Q96KJ9 171 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 ZCCHC2Q9C0B9 1178 aaKnown RBP12.72□□□□□ -0.37
MCF2L-213ENST00000421756 MAGIXQ9H6Y5 334 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 TVP23BQ9NYZ1 205 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 TBC1D3DA0A087WVF3 549 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 TBC1D3IA0A087WXS9 549 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 TBC1D3EA0A087X179 549 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 TBC1D3KA0A087X1G2 549 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 LINC01553A4QN01 128 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 TBC1D3FA6NER0 549 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-213ENST00000421756 TBC1D3LB9A6J9 549 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 ANHXE9PGG2 379 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 DLGAP3O95886 979 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 TBC1D3HP0C7X1 549 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 BMP4P12644 408 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 PTPN5P54829 565 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 IFITM3Q01628 133 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 HNRNPA1L2Q32P51 320 aaKnown RBP12.72□□□□□ -0.37
MCF2L-213ENST00000421756 TBC1D3GQ6DHY5 549 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 TBC1D3CQ6IPX1 549 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 PAQR6Q6TCH4 344 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 VITQ6UXI7 678 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 TBC1D3Q8IZP1 549 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-213ENST00000421756 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.72□□□□□ -0.37
MCF2L-213ENST00000421756 ZCCHC10Q8TBK6 192 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 APH1BQ8WW43 257 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 RAD9AQ99638 391 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 IL23AQ9NPF7 189 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 ZCCHC3Q9NUD5 404 aaKnown RBP12.72□□□□□ -0.37
MCF2L-213ENST00000421756 GPR52Q9Y2T5 361 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 C1orf226A1L170 272 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 ISM1B1AKI9 464 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 SLC16A5O15375 505 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 TMPRSS11DO60235 418 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 AP2A2O94973 939 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 TPP2P29144 1249 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-213ENST00000421756 SOX3P41225 446 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 PTGES3Q15185 160 aaKnown RBP12.71□□□□□ -0.37
MCF2L-213ENST00000421756 WSCD2Q2TBF2 565 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 GPAT3Q53EU6 434 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 IRAK1BP1Q5VVH5 260 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 ZNF554Q86TJ5 538 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 KAT2AQ92830 837 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 ZNF300Q96RE9 604 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-213ENST00000421756 BBS4Q96RK4 519 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 CENPOQ9BU64 300 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 YTHDF1Q9BYJ9 559 aaKnown RBP12.71□□□□□ -0.37
MCF2L-213ENST00000421756 SEMA3GQ9NS98 782 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 DPP7Q9UHL4 492 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 SLC16A6O15403 523 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 ERI3O43414 337 aaKnown RBP12.71□□□□□ -0.37
MCF2L-213ENST00000421756 IFNW1P05000 195 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 NKX2-5P52952 324 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-213ENST00000421756 ITGA1P56199 1179 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 ZNF542PQ5EBM4 170 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 ARMCX4Q5H9R4 360 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 LACC1Q8IV20 430 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 PLPP6Q8IY26 295 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 ADGRF3Q8IZF5 1079 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 ZFP41Q8N8Y5 198 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 SLC38A5Q8WUX1 472 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 GGHQ92820 318 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 NACC2Q96BF6 587 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 EFCAB11Q9BUY7 163 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 C14orf119Q9NWQ9 140 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 TOR4AQ9NXH8 423 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 ASIC5Q9NY37 505 aa12.71□□□□□ -0.37
MCF2L-213ENST00000421756 DNMT3AQ9Y6K1 912 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-213ENST00000421756 SLC35F4A4IF30 521 aa12.71□□□□□ -0.38
MCF2L-213ENST00000421756 TRIM64CA6NLI5 447 aa12.71□□□□□ -0.38
MCF2L-213ENST00000421756 H0Y8X5 98 aa12.71□□□□□ -0.38
MCF2L-213ENST00000421756 PSMD11O00231 422 aa12.71□□□□□ -0.38
MCF2L-213ENST00000421756 CISD3P0C7P0 127 aa12.71□□□□□ -0.38
MCF2L-213ENST00000421756 AK4P27144 223 aaPredicted RBP12.71□□□□□ -0.38
MCF2L-213ENST00000421756 EIF2B2P49770 351 aaKnown RBP12.71□□□□□ -0.38
MCF2L-213ENST00000421756 OLR1P78380 273 aa12.71□□□□□ -0.38
MCF2L-213ENST00000421756 ELAVL3Q14576 367 aaKnown RBP12.71□□□□□ -0.38
MCF2L-213ENST00000421756 GPR19Q15760 415 aa12.71□□□□□ -0.38
MCF2L-213ENST00000421756 TSTQ16762 297 aaKnown RBP12.71□□□□□ -0.38
MCF2L-213ENST00000421756 DGUOKQ16854 277 aa12.71□□□□□ -0.38
MCF2L-213ENST00000421756 C6orf120Q7Z4R8 191 aa12.71□□□□□ -0.38
MCF2L-213ENST00000421756 VN1R5Q7Z5H4 357 aa12.71□□□□□ -0.38
MCF2L-213ENST00000421756 ZNF761Q86XN6 746 aaPredicted RBP12.71□□□□□ -0.38
MCF2L-213ENST00000421756 YAF2Q8IY57 180 aa12.71□□□□□ -0.38
MCF2L-213ENST00000421756 OR4E2Q8NGC2 313 aa12.71□□□□□ -0.38
MCF2L-213ENST00000421756 HPS1Q92902 700 aa12.71□□□□□ -0.38
MCF2L-213ENST00000421756 REPS1Q96D71 796 aa12.71□□□□□ -0.38
MCF2L-213ENST00000421756 CD93Q9NPY3 652 aa12.71□□□□□ -0.38
MCF2L-213ENST00000421756 CLEC2DQ9UHP7 191 aa12.71□□□□□ -0.38
MCF2L-213ENST00000421756 CCDC159P0C7I6 412 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 LINC00271P0C7V0 271 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 TOP3AQ13472 1001 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-213ENST00000421756 TRIM73Q86UV7 250 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 TCEANCQ8N8B7 351 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms