RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 RGNQ15493 299 aa19.87■□□□□ 0.77
GPC1-202ENST00000420138 TEAD4Q15561 434 aa19.87■□□□□ 0.77
GPC1-202ENST00000420138 MTX3Q5HYI7 312 aa19.87■□□□□ 0.77
GPC1-202ENST00000420138 SLC25A45Q8N413 288 aa19.87■□□□□ 0.77
GPC1-202ENST00000420138 NATD1Q8N6N6 113 aa19.87■□□□□ 0.77
GPC1-202ENST00000420138 FAM86B1Q8N7N1 296 aa19.87■□□□□ 0.77
GPC1-202ENST00000420138 DPH2Q9BQC3 489 aaPredicted RBP19.87■□□□□ 0.77
GPC1-202ENST00000420138 SEMA6CQ9H3T2 930 aa19.87■□□□□ 0.77
GPC1-202ENST00000420138 EPS8L2Q9H6S3 715 aa19.87■□□□□ 0.77
GPC1-202ENST00000420138 CXorf36Q9H7Y0 433 aa19.87■□□□□ 0.77
GPC1-202ENST00000420138 FAM60AQ9NP50 221 aa19.87■□□□□ 0.77
GPC1-202ENST00000420138 EHD3Q9NZN3 535 aa19.87■□□□□ 0.77
GPC1-202ENST00000420138 PCDHGB4Q9UN71 923 aa19.87■□□□□ 0.77
GPC1-202ENST00000420138 NUDT7P0C024 238 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 PPIBP23284 216 aaKnown RBP19.86■□□□□ 0.77
GPC1-202ENST00000420138 BTN3A2P78410 334 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 BNIP3Q12983 259 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 VMACQ2NL98 169 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 PLK5Q496M5 336 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 OR52E8Q6IFG1 317 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 ZCCHC8Q6NZY4 707 aaKnown RBP19.86■□□□□ 0.77
GPC1-202ENST00000420138 AMIGO2Q86SJ2 522 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 GALNT4Q8N4A0 578 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 MARVELD2Q8N4S9 558 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 OR5P2Q8WZ92 322 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 EXOSC8Q96B26 276 aaKnown RBP19.86■□□□□ 0.77
GPC1-202ENST00000420138 PPWD1Q96BP3 646 aaKnown RBP19.86■□□□□ 0.77
GPC1-202ENST00000420138 TRAPPC9Q96Q05 1148 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 SLC35A5Q9BS91 424 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 ACSL6Q9UKU0 697 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 CES1P1Q9UKY3 287 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 A0A1B0GTW7 788 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 PGRMC2O15173 223 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 PDPK1O15530 556 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 NTRK1P04629 796 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 RETP07949 1114 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 ZNF26P17031 533 aaPredicted RBP19.86■□□□□ 0.77
GPC1-202ENST00000420138 CAPZBP47756 277 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 NKG7Q16617 165 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 C14orf28Q4W4Y0 310 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 COX20Q5RI15 118 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.86■□□□□ 0.77
GPC1-202ENST00000420138 CEP68Q76N32 757 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 BMP8AQ7Z5Y6 402 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 ANKFN1Q8N957 763 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 KLHL6Q8WZ60 621 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 TMEM121BQ9BXQ6 578 aaPredicted RBP19.86■□□□□ 0.77
GPC1-202ENST00000420138 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.86■□□□□ 0.77
GPC1-202ENST00000420138 AGPAT4Q9NRZ5 378 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 SIRT3Q9NTG7 399 aaPredicted RBP19.86■□□□□ 0.77
GPC1-202ENST00000420138 DCAF13Q9NV06 445 aaKnown RBP19.86■□□□□ 0.77
GPC1-202ENST00000420138 FBXW2Q9UKT8 454 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 MRPS2Q9Y399 296 aaKnown RBP19.86■□□□□ 0.77
GPC1-202ENST00000420138 V9GYQ6 96 aa19.86■□□□□ 0.77
GPC1-202ENST00000420138 KMT2EQ8IZD2 1858 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 PROM1O43490 865 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 AIFM1O95831 613 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 PROS1P07225 676 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 BMP2P12643 396 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 PI4KAP42356 2102 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 C18orf63Q68DL7 685 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 ARMC6Q6NXE6 501 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 ENPP6Q6UWR7 440 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 CAMKVQ8NCB2 501 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 OR5AK3PQ8NH89 298 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 SEPHS2Q99611 448 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 SLC38A3Q99624 504 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 MAPKAP1Q9BPZ7 522 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 FAIM2Q9BWQ8 316 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 COQ10BQ9H8M1 238 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 AP4B1Q9Y6B7 739 aa19.85■□□□□ 0.77
GPC1-202ENST00000420138 MDC1Q14676 2089 aaKnown RBP19.85■□□□□ 0.77
GPC1-202ENST00000420138 GLOD5A6NK44 160 aa19.84■□□□□ 0.77
GPC1-202ENST00000420138 TPST1O60507 370 aa19.84■□□□□ 0.77
GPC1-202ENST00000420138 DNAJB6O75190 326 aa19.84■□□□□ 0.77
GPC1-202ENST00000420138 GMNNO75496 209 aa19.84■□□□□ 0.77
GPC1-202ENST00000420138 TNFRSF21O75509 655 aa19.84■□□□□ 0.77
GPC1-202ENST00000420138 AVPR2P30518 371 aa19.84■□□□□ 0.77
GPC1-202ENST00000420138 TGM3Q08188 693 aa19.84■□□□□ 0.77
GPC1-202ENST00000420138 TRIML2Q8N7C3 387 aa19.84■□□□□ 0.77
GPC1-202ENST00000420138 OR52N2Q8NGI0 321 aa19.84■□□□□ 0.77
GPC1-202ENST00000420138 PSMA8Q8TAA3 256 aa19.84■□□□□ 0.77
GPC1-202ENST00000420138 ZCCHC10Q8TBK6 192 aa19.84■□□□□ 0.77
GPC1-202ENST00000420138 IL21RQ9HBE5 538 aa19.84■□□□□ 0.77
GPC1-202ENST00000420138 SLC35C2Q9NQQ7 365 aa19.84■□□□□ 0.77
GPC1-202ENST00000420138 ACSS1Q9NUB1 689 aaPredicted RBP19.84■□□□□ 0.77
GPC1-202ENST00000420138 KCMF1Q9P0J7 381 aa19.84■□□□□ 0.77
GPC1-202ENST00000420138 CORO2BQ9UQ03 480 aa19.84■□□□□ 0.77
GPC1-202ENST00000420138 B4GALT2O60909 372 aa19.83■□□□□ 0.77
GPC1-202ENST00000420138 CTSBP07858 339 aa19.83■□□□□ 0.77
GPC1-202ENST00000420138 CNR2P34972 360 aa19.83■□□□□ 0.77
GPC1-202ENST00000420138 MANFP55145 182 aaKnown RBP19.83■□□□□ 0.77
GPC1-202ENST00000420138 MLC1Q15049 377 aa19.83■□□□□ 0.77
GPC1-202ENST00000420138 TMEM214Q6NUQ4 689 aaKnown RBP19.83■□□□□ 0.77
GPC1-202ENST00000420138 ERICH5Q6P6B1 374 aa19.83■□□□□ 0.77
GPC1-202ENST00000420138 KLHL35Q6PF15 583 aa19.83■□□□□ 0.77
GPC1-202ENST00000420138 UGT2A3Q6UWM9 527 aa19.83■□□□□ 0.77
GPC1-202ENST00000420138 C19orf47Q8N9M1 422 aaKnown RBP19.83■□□□□ 0.77
GPC1-202ENST00000420138 FAM162AQ96A26 154 aa19.83■□□□□ 0.77
GPC1-202ENST00000420138 CHID1Q9BWS9 393 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms