RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 PAGE3Q5JUK9 113 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 PDSS2Q86YH6 399 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 CACTIN-AS1Q8N1I8 211 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 AMER3Q8N944 861 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 TTC29Q8NA56 475 aaPredicted RBP13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 OR7A2PQ8NGA2 310 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 OR8J3Q8NGG0 315 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 CLHC1Q8NHS4 586 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 FBXO27Q8NI29 283 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 PPCDCQ96CD2 204 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 RAB3IPQ96QF0 476 aaPredicted RBP13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 NPAS2Q99743 824 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 WDR41Q9HAD4 459 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 ANKHQ9HCJ1 492 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 FGF21Q9NSA1 209 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 TMEM181Q9P2C4 612 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 CROTQ9UKG9 612 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 PSME2Q9UL46 239 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 ATXN7L1Q9ULK2 861 aaPredicted RBP13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 ATG4BQ9Y4P1 393 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 PCDHGA7Q9Y5G6 932 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 SPEGQ15772 3267 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 CYR61O00622 381 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 FOXS1O43638 330 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 DNAJA2O60884 412 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 OR2B3O76000 313 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 KCNH1O95259 989 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 GBAP04062 536 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 EIF2S1P05198 315 aaKnown RBP13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 CERS1P27544 350 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 TLX1P31314 330 aaPredicted RBP13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 MAGEA8P43361 318 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 CPA2P48052 419 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 CORO7P57737 925 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 SLC25A3Q00325 362 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 TNFRSF17Q02223 184 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 DEFB134Q4QY38 66 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 CDCP2Q5VXM1 449 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 SLC48A1Q6P1K1 146 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 GPR135Q8IZ08 494 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 N4BP2L2Q92802 583 aaPredicted RBP13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 CCDC74BQ96LY2 380 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 CNTNAP3BQ96NU0 1288 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 SH3GL1Q99961 368 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 CNTNAP3Q9BZ76 1288 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 PAIP1Q9H074 479 aaKnown RBP13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 PRM3Q9NNZ6 103 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 SPAG4Q9NPE6 437 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 MIEF1Q9NQG6 463 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 TEX10Q9NXF1 929 aaPredicted RBP13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 CDC14AQ9UNH5 594 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 SRPK3Q9UPE1 567 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 WASF3Q9UPY6 502 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 NAALAD2Q9Y3Q0 740 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 SPACA6W5XKT8 324 aa13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 MDC1Q14676 2089 aaKnown RBP13.48□□□□□ -0.25
SHMT1P1-201ENST00000419974 CHD8Q9HCK8 2581 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 SYNDIG1LA6NDD5 238 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 AKAP10O43572 662 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 LRATO95237 230 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 FGF5P12034 268 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 NQO1P15559 274 aaKnown RBP13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 SLC6A2P23975 617 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 PPM1FP49593 454 aaPredicted RBP13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 PSME3P61289 254 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 MXRA7P84157 204 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 BIKQ13323 160 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 RUNX2Q13950 521 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 NFYCQ13952 458 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 FXNQ16595 210 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 MPEG1Q2M385 716 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 DEFB110Q30KQ9 67 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 OR4F3Q6IEY1 312 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 SLC2A7Q6PXP3 512 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 TICAM1Q8IUC6 712 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 DEFB107AQ8IZN7 70 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 AGBL5Q8NDL9 886 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 DEFB124Q8NES8 71 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 OR1L3Q8NH93 324 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 DNAJB14Q8TBM8 379 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 OR5P2Q8WZ92 322 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 TANKQ92844 425 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 UTP4Q969X6 686 aaKnown RBP13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 NEUROD4Q9HD90 331 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 FBXO8Q9NRD0 319 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 CD300AQ9UGN4 299 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 KLHL3Q9UH77 587 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 MRPS2Q9Y399 296 aaKnown RBP13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 NEUROG3Q9Y4Z2 214 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 PCDHB3Q9Y5E6 796 aa13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 GOLGA4Q13439 2230 aaKnown RBP13.47□□□□□ -0.25
SHMT1P1-201ENST00000419974 EPG5Q9HCE0 2579 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 MYO1GB0I1T2 1018 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 B4E171 279 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 TMEM150CB9EJG8 249 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 C9JVG2 144 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 RFXANKO14593 260 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 RFPL3O75679 317 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 SLITRK5O94991 958 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 AIFM1O95831 613 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms