RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 LRRC70Q7Z2Q7 622 aa8.79□□□□□ -1
NUP50-205ENST00000419387 CLNKQ7Z7G1 428 aa8.79□□□□□ -1
NUP50-205ENST00000419387 CMC1Q7Z7K0 106 aa8.79□□□□□ -1
NUP50-205ENST00000419387 TBC1D1Q86TI0 1168 aaPredicted RBP8.79□□□□□ -1
NUP50-205ENST00000419387 CCDC25Q86WR0 208 aa8.79□□□□□ -1
NUP50-205ENST00000419387 SULF2Q8IWU5 870 aa8.79□□□□□ -1
NUP50-205ENST00000419387 TMEM132CQ8N3T6 1108 aa8.79□□□□□ -1
NUP50-205ENST00000419387 TMEM156Q8N614 296 aa8.79□□□□□ -1
NUP50-205ENST00000419387 CEP112Q8N8E3 955 aa8.79□□□□□ -1
NUP50-205ENST00000419387 POGLUT1Q8NBL1 392 aa8.79□□□□□ -1
NUP50-205ENST00000419387 SRFBP1Q8NEF9 429 aaKnown RBP8.79□□□□□ -1
NUP50-205ENST00000419387 MNS1Q8NEH6 495 aa8.79□□□□□ -1
NUP50-205ENST00000419387 ZNF473Q8WTR7 871 aaKnown RBP8.79□□□□□ -1
NUP50-205ENST00000419387 EXT2Q93063 718 aa8.79□□□□□ -1
NUP50-205ENST00000419387 UBE2E3Q969T4 207 aa8.79□□□□□ -1
NUP50-205ENST00000419387 KCNC2Q96PR1 638 aa8.79□□□□□ -1
NUP50-205ENST00000419387 CSF3RQ99062 836 aa8.79□□□□□ -1
NUP50-205ENST00000419387 CCDC77Q9BR77 488 aa8.79□□□□□ -1
NUP50-205ENST00000419387 TBCDQ9BTW9 1192 aa8.79□□□□□ -1
NUP50-205ENST00000419387 ALOXE3Q9BYJ1 711 aa8.79□□□□□ -1
NUP50-205ENST00000419387 RUBCNLQ9H714 662 aa8.79□□□□□ -1
NUP50-205ENST00000419387 LYRM4Q9HD34 91 aa8.79□□□□□ -1
NUP50-205ENST00000419387 CHST11Q9NPF2 352 aa8.79□□□□□ -1
NUP50-205ENST00000419387 ADAP2Q9NPF8 381 aa8.79□□□□□ -1
NUP50-205ENST00000419387 NUDT4Q9NZJ9 180 aa8.79□□□□□ -1
NUP50-205ENST00000419387 KCMF1Q9P0J7 381 aa8.79□□□□□ -1
NUP50-205ENST00000419387 VTI1BQ9UEU0 232 aa8.79□□□□□ -1
NUP50-205ENST00000419387 KLF13Q9Y2Y9 288 aaPredicted RBP8.79□□□□□ -1
NUP50-205ENST00000419387 YARS2Q9Y2Z4 477 aaKnown RBP8.79□□□□□ -1
NUP50-205ENST00000419387 ASB1Q9Y576 335 aa8.79□□□□□ -1
NUP50-205ENST00000419387 MYOCOSA0A1B0GUC4 107 aa8.78□□□□□ -1
NUP50-205ENST00000419387 SUPT3HB4E1H0 165 aa8.78□□□□□ -1
NUP50-205ENST00000419387 K7EPI3 171 aa8.78□□□□□ -1
NUP50-205ENST00000419387 UBXN8O00124 270 aa8.78□□□□□ -1
NUP50-205ENST00000419387 PEX1O43933 1283 aa8.78□□□□□ -1
NUP50-205ENST00000419387 PRKNO60260 465 aaPredicted RBP8.78□□□□□ -1
NUP50-205ENST00000419387 KERAO60938 352 aa8.78□□□□□ -1
NUP50-205ENST00000419387 SUPT3HO75486 399 aa8.78□□□□□ -1
NUP50-205ENST00000419387 PRF1P14222 555 aa8.78□□□□□ -1
NUP50-205ENST00000419387 ABOP16442 354 aa8.78□□□□□ -1
NUP50-205ENST00000419387 AGAP20933 346 aa8.78□□□□□ -1
NUP50-205ENST00000419387 ATP5A1P25705 553 aaKnown RBP8.78□□□□□ -1
NUP50-205ENST00000419387 HTR1EP28566 365 aa8.78□□□□□ -1
NUP50-205ENST00000419387 MEOX1P50221 254 aa8.78□□□□□ -1
NUP50-205ENST00000419387 SSR4P51571 173 aa8.78□□□□□ -1
NUP50-205ENST00000419387 HSF1Q00613 529 aa8.78□□□□□ -1
NUP50-205ENST00000419387 PCDH1Q08174 1060 aa8.78□□□□□ -1
NUP50-205ENST00000419387 STX4Q12846 297 aa8.78□□□□□ -1
NUP50-205ENST00000419387 BMPR2Q13873 1038 aa8.78□□□□□ -1
NUP50-205ENST00000419387 SERTAD2Q14140 314 aa8.78□□□□□ -1
NUP50-205ENST00000419387 NAA30Q147X3 362 aaPredicted RBP8.78□□□□□ -1
NUP50-205ENST00000419387 SLMAPQ14BN4 828 aa8.78□□□□□ -1
NUP50-205ENST00000419387 ELAVL1Q15717 326 aaKnown RBP8.78□□□□□ -1
NUP50-205ENST00000419387 TMEM35AQ53FP2 167 aa8.78□□□□□ -1
NUP50-205ENST00000419387 MED27Q6P2C8 311 aa8.78□□□□□ -1
NUP50-205ENST00000419387 ZNF793Q6ZN11 406 aa8.78□□□□□ -1
NUP50-205ENST00000419387 CHSY3Q70JA7 882 aa8.78□□□□□ -1
NUP50-205ENST00000419387 UBE3DQ7Z6J8 389 aa8.78□□□□□ -1
NUP50-205ENST00000419387 RELL1Q8IUW5 271 aa8.78□□□□□ -1
NUP50-205ENST00000419387 CHERPQ8IWX8 916 aaKnown RBP8.78□□□□□ -1
NUP50-205ENST00000419387 GPALPP1Q8IXQ4 340 aa8.78□□□□□ -1
NUP50-205ENST00000419387 SRRM1Q8IYB3 904 aaKnown RBP8.78□□□□□ -1
NUP50-205ENST00000419387 LAS2Q8IYD9 372 aa8.78□□□□□ -1
NUP50-205ENST00000419387 CYP4Z2PQ8N1L4 340 aa8.78□□□□□ -1
NUP50-205ENST00000419387 ACOT4Q8N9L9 421 aa8.78□□□□□ -1
NUP50-205ENST00000419387 MORN4Q8NDC4 146 aa8.78□□□□□ -1
NUP50-205ENST00000419387 C16orf52Q8NHV5 167 aa8.78□□□□□ -1
NUP50-205ENST00000419387 DAZLQ92904 295 aaKnown RBP8.78□□□□□ -1
NUP50-205ENST00000419387 NXNL1Q96CM4 212 aa8.78□□□□□ -1
NUP50-205ENST00000419387 ATOH8Q96SQ7 321 aa8.78□□□□□ -1
NUP50-205ENST00000419387 MAPKAP1Q9BPZ7 522 aa8.78□□□□□ -1
NUP50-205ENST00000419387 MS4A8Q9BY19 250 aa8.78□□□□□ -1
NUP50-205ENST00000419387 PRM3Q9NNZ6 103 aa8.78□□□□□ -1
NUP50-205ENST00000419387 TIMMDC1Q9NPL8 285 aa8.78□□□□□ -1
NUP50-205ENST00000419387 IGSF5Q9NSI5 407 aa8.78□□□□□ -1
NUP50-205ENST00000419387 OPTCQ9UBM4 332 aa8.78□□□□□ -1
NUP50-205ENST00000419387 ACOT9Q9Y305 439 aa8.78□□□□□ -1
NUP50-205ENST00000419387 MEMO1Q9Y316 297 aa8.78□□□□□ -1
NUP50-205ENST00000419387 CLCA3PQ9Y6N3 262 aa8.78□□□□□ -1
NUP50-205ENST00000419387 TMEM200CA6NKL6 621 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 ENO4A6NNW6 628 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 SYCE1LA8MT33 242 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 A8MVJ9 347 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 RTCAO00442 366 aaKnown RBP8.77□□□□□ -1.01
NUP50-205ENST00000419387 PRRG2O14669 202 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 TFECO14948 347 aaPredicted RBP8.77□□□□□ -1.01
NUP50-205ENST00000419387 ZNHIT1O43257 154 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 LDB3O75112 727 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 OR2J2O76002 312 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 SCELO95171 688 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 TGFB1P01137 390 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 PCNAP12004 261 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 MTHFD2P13995 350 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 EPB42P16452 691 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 TNNI3P19429 210 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 HIST1H1TP22492 207 aaPredicted RBP8.77□□□□□ -1.01
NUP50-205ENST00000419387 SERPINB1P30740 379 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 PTGER1P34995 402 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 AP5B1Q2VPB7 878 aa8.77□□□□□ -1.01
NUP50-205ENST00000419387 DEPDC1Q5TB30 811 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms