RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 TRIM45Q9H8W5 580 aaPredicted RBP15.38■□□□□ 0.05
LINC00404-201ENST00000418660 PSD3Q9NYI0 1048 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 LRFN1Q9P244 771 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 OSGIN2Q9Y236 505 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 RNF11Q9Y3C5 154 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 USP9XQ93008 2570 aaPredicted RBP15.38■□□□□ 0.05
LINC00404-201ENST00000418660 DOPEY2Q9Y3R5 2298 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 PRRC2CQ9Y520 2896 aaKnown RBP15.37■□□□□ 0.05
LINC00404-201ENST00000418660 TRBV11-1A0A0K0K1C0 115 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 RIPK2O43353 540 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 NEURL1O76050 574 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 CLDN9O95484 217 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 LDLRP01130 860 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 TRHRP34981 398 aaPredicted RBP15.37■□□□□ 0.05
LINC00404-201ENST00000418660 RAP1GDS1P52306 607 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 RPS13P62277 151 aaKnown RBP15.37■□□□□ 0.05
LINC00404-201ENST00000418660 STX4Q12846 297 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 CPSF6Q16630 551 aaKnown RBP eCLIP15.37■□□□□ 0.05
LINC00404-201ENST00000418660 ZNF468Q5VIY5 522 aaPredicted RBP15.37■□□□□ 0.05
LINC00404-201ENST00000418660 SLC25A25Q6KCM7 469 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 TMEM178AQ8NBL3 297 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 C7orf57Q8NEG2 295 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 NCLNQ969V3 563 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 ATP6V1E2Q96A05 226 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 MTBPQ96DY7 904 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 PHF21BQ96EK2 531 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 MRPL57Q9BQC6 102 aaKnown RBP15.37■□□□□ 0.05
LINC00404-201ENST00000418660 SORBS1Q9BX66 1292 aaKnown RBP15.37■□□□□ 0.05
LINC00404-201ENST00000418660 ALOXE3Q9BYJ1 711 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 NOL11Q9H8H0 719 aaKnown RBP15.37■□□□□ 0.05
LINC00404-201ENST00000418660 KLHL1Q9NR64 748 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 VTI1BQ9UEU0 232 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 FBXW2Q9UKT8 454 aa15.37■□□□□ 0.05
LINC00404-201ENST00000418660 CYSRT1A8MQ03 144 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 FOXE1O00358 373 aaPredicted RBP15.36■□□□□ 0.05
LINC00404-201ENST00000418660 PLPP1O14494 284 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 FCHO1O14526 889 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 OR7A17O14581 309 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 IFNA16P05015 189 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 SP1P08047 785 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 CPN2P22792 545 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 MST1P26927 711 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 GCAP28676 217 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 CYB561P49447 251 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 HLCSP50747 726 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 PMP22Q01453 160 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 SLAMF1Q13291 335 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 CUL3Q13618 768 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 SERTAD2Q14140 314 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 ZRSR2Q15696 482 aaKnown RBP15.36■□□□□ 0.05
LINC00404-201ENST00000418660 C4orf17Q53FE4 359 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 ADGRD1Q6QNK2 874 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 TIFABQ6ZNK6 161 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 ZCCHC7Q8N3Z6 543 aaKnown RBP15.36■□□□□ 0.05
LINC00404-201ENST00000418660 WDR20Q8TBZ3 569 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 DAZLQ92904 295 aaKnown RBP15.36■□□□□ 0.05
LINC00404-201ENST00000418660 CCDC77Q9BR77 488 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 NTMT1Q9BV86 223 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 HES7Q9BYE0 225 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 MRPL46Q9H2W6 279 aaKnown RBP15.36■□□□□ 0.05
LINC00404-201ENST00000418660 MS4A12Q9NXJ0 267 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 ZNF223Q9UK11 482 aaPredicted RBP15.36■□□□□ 0.05
LINC00404-201ENST00000418660 PCTPQ9UKL6 214 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 CLCA3PQ9Y6N3 262 aa15.36■□□□□ 0.05
LINC00404-201ENST00000418660 ASPDHA6ND91 283 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 LDB3O75112 727 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 ZFAND5O76080 213 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 STSP08842 583 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 FAM153BP0C7A2 387 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 ARL1P40616 181 aaPredicted RBP15.35■□□□□ 0.05
LINC00404-201ENST00000418660 CCNG1P51959 295 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 FAM153CQ494X1 144 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 GFRALQ6UXV0 394 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 GALNTL5Q7Z4T8 443 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 GPR180Q86V85 440 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 ZNF227Q86WZ6 799 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 TMEM151AQ8N4L1 468 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 MORN4Q8NDC4 146 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 OR52B6Q8NGF0 335 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 OR14A16Q8NHC5 309 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 THAP3Q8WTV1 239 aaPredicted RBP15.35■□□□□ 0.05
LINC00404-201ENST00000418660 PTPMT1Q8WUK0 201 aaPredicted RBP15.35■□□□□ 0.05
LINC00404-201ENST00000418660 ANKRD9Q96BM1 317 aaPredicted RBP15.35■□□□□ 0.05
LINC00404-201ENST00000418660 CDK15Q96Q40 435 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 TXLNGYQ9BZA5 131 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 ZBTB26Q9HCK0 441 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 SEC14L3Q9UDX4 400 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 PLEKHB1Q9UF11 243 aaPredicted RBP15.35■□□□□ 0.05
LINC00404-201ENST00000418660 FETUBQ9UGM5 382 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 PHF11Q9UIL8 331 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 PPT2Q9UMR5 302 aa15.35■□□□□ 0.05
LINC00404-201ENST00000418660 MYOCOSA0A1B0GUC4 107 aa15.34■□□□□ 0.05
LINC00404-201ENST00000418660 A0A1B0GUH1 482 aa15.34■□□□□ 0.05
LINC00404-201ENST00000418660 LRRTM2O43300 516 aa15.34■□□□□ 0.05
LINC00404-201ENST00000418660 ITGA10O75578 1167 aa15.34■□□□□ 0.05
LINC00404-201ENST00000418660 SLC25A12O75746 678 aa15.34■□□□□ 0.05
LINC00404-201ENST00000418660 UNC5CO95185 931 aa15.34■□□□□ 0.05
LINC00404-201ENST00000418660 SBK3P0C264 359 aa15.34■□□□□ 0.05
LINC00404-201ENST00000418660 TNNI3P19429 210 aa15.34■□□□□ 0.05
LINC00404-201ENST00000418660 NEK2P51955 445 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms