RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 TBK1Q9UHD2 729 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 ANAPC7Q9UJX3 599 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 NOCTQ9UK39 431 aaKnown RBP2.49□□□□□ -2.01
VPS41-206ENST00000418457 FAF1Q9UNN5 650 aaPredicted RBP2.49□□□□□ -2.01
VPS41-206ENST00000418457 COQ4Q9Y3A0 265 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 IKBKGQ9Y6K9 419 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 COL4A1P02462 1669 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 CEP350Q5VT06 3117 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 ASTN2O75129 1339 aaPredicted RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 COL2A1P02458 1487 aaPredicted RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 IGLV3-22A0A075B6J6 115 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 LOC102723996A0A087X1L8 192 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 A0A0G2JND7 137 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 A0A1W2PPI3 338 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 ARHGEF35A5YM69 484 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 RSPH10B2B2RC85 870 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 E7ESA3 106 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 PRR23D1E9PI22 279 aaPredicted RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 H0YJX3 145 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 P2RY10O00398 339 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 TRDMT1O14717 391 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 MEIS2O14770 477 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 CASQ2O14958 399 aaPredicted RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 DENRO43583 198 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 SSX4O60224 188 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 PRAMEF11O60813 436 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 DKC1O60832 514 aaKnown RBP eCLIP2.48□□□□□ -2.01
VPS41-206ENST00000418457 PFDN1O60925 122 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 ERAL1O75616 437 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 CREG1O75629 220 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 ZNF189O75820 626 aaPredicted RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 PSMD10O75832 226 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 TOMM70O94826 608 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 SLITRK3O94933 977 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 KLHL2O95198 593 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 LYPLA2O95372 231 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 TNFAIP8O95379 198 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 LSM8O95777 96 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 BCL10O95999 233 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 MT-ND3P03897 115 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 CALB1P05937 261 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 TPOP07202 933 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 SERPINA6P08185 405 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 RSPH10BP0C881 870 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 FAM200BP0CF97 657 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 TRIM49P0CI25 452 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 TRIM49CP0CI26 452 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 PRR23D2P0DMB1 279 aaPredicted RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 NR2F1P10589 423 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 RALAP11233 206 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 CCDC130P13994 396 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 IDO1P14902 403 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 UQCRBP14927 111 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 AKR1B1P15121 316 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 AOC1P19801 751 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 GCAP28676 217 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 PRDX6P30041 224 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 CDC25CP30307 473 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 NMT1P30419 496 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 STIP1P31948 543 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 RAD52P43351 418 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 RPL5P46777 297 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 SERPINB9P50453 376 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 MMP15P51511 669 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 PSMD7P51665 324 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 VCPP55072 806 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 NOP14P78316 857 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 PHEXP78562 749 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 GTF2BQ00403 316 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 PPARDQ03181 441 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 MBTD1Q05BQ5 628 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 WASHC5Q12768 1159 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 PDIA2Q13087 525 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 NAB1Q13506 487 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 SNX1Q13596 522 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 BAATQ14032 418 aaPredicted RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 KIR2DS3Q14952 304 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 TRIP13Q15645 432 aaPredicted RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 SLC1A5Q15758 541 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 PKN2Q16513 984 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 ANKRD20A4Q4UJ75 823 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 CFAP157Q5JU67 520 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 RNASEH2BQ5TBB1 312 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 MFSD4BQ5TF39 518 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 STPG1Q5TH74 334 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 C1orf146Q5VVC0 180 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 GPR139Q6DWJ6 353 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 ZFP1Q6P2D0 407 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 IZUMO2Q6UXV1 221 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 ANO5Q75V66 913 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 NIPA1Q7RTP0 329 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 TRMT1LQ7Z2T5 733 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 DHDDSQ86SQ9 333 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 SPATA24Q86W54 205 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 PHF13Q86YI8 300 aaPredicted RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 CRLF3Q8IUI8 442 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 ZBED8Q8IZ13 594 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 MCOLN2Q8IZK6 566 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 PDIK1LQ8N165 341 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms