RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 NT5C1AQ9BXI3 368 aa6.12□□□□□ -1.43
CCNT1-202ENST00000417344 NXF3Q9H4D5 531 aaKnown RBP6.12□□□□□ -1.43
CCNT1-202ENST00000417344 SYNDIG1Q9H7V2 258 aa6.12□□□□□ -1.43
CCNT1-202ENST00000417344 EQTNQ9NQ60 294 aa6.12□□□□□ -1.43
CCNT1-202ENST00000417344 TXNL4BQ9NX01 149 aaKnown RBP6.12□□□□□ -1.43
CCNT1-202ENST00000417344 IMPAD1Q9NX62 359 aa6.12□□□□□ -1.43
CCNT1-202ENST00000417344 COMMD3Q9UBI1 195 aa6.12□□□□□ -1.43
CCNT1-202ENST00000417344 EPHA6Q9UF33 1036 aa6.12□□□□□ -1.43
CCNT1-202ENST00000417344 GPR160Q9UJ42 338 aa6.12□□□□□ -1.43
CCNT1-202ENST00000417344 ZNF225Q9UK10 706 aa6.12□□□□□ -1.43
CCNT1-202ENST00000417344 DUSP12Q9UNI6 340 aa6.12□□□□□ -1.43
CCNT1-202ENST00000417344 EXO1Q9UQ84 846 aaKnown RBP6.12□□□□□ -1.43
CCNT1-202ENST00000417344 LSM2Q9Y333 95 aaKnown RBP6.12□□□□□ -1.43
CCNT1-202ENST00000417344 SLC6A5Q9Y345 797 aa6.12□□□□□ -1.43
CCNT1-202ENST00000417344 POLR3HQ9Y535 204 aaPredicted RBP6.12□□□□□ -1.43
CCNT1-202ENST00000417344 BPTFQ12830 3046 aa6.12□□□□□ -1.43
CCNT1-202ENST00000417344 STRCP1A6NGW2 1772 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 TMEM82A0PJX8 343 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 SUPT3HB4E1H0 165 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 GPR171O14626 319 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 CASC3O15234 703 aaKnown RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 TPST2O60704 377 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 CSO75390 466 aaKnown RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 RGS11O94810 467 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 TOXO94900 526 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 JCHAINP01591 159 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 S100A9P06702 114 aaKnown RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 ZNF806P0C7X5 589 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 ITGB8P26012 769 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 GRNP28799 593 aaKnown RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 STARP49675 285 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 VEGFBP49765 207 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 SULT1E1P49888 294 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 KIAA1024LP59773 190 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 PURAQ00577 322 aaKnown RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 RELQ04864 619 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 SPEM2Q0P670 501 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 PGM5Q15124 567 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 SPHARQ15513 63 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 RBBP7Q16576 425 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 FAM174BQ3ZCQ3 159 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 ARHGAP15Q53QZ3 475 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 FBXO48Q5FWF7 155 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 XKR3Q5GH77 459 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 C22orf42Q6IC83 251 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 MSANTD2Q6P1R3 559 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 WASH2PQ6VEQ5 465 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 ZNF730Q6ZMV8 503 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 SLC16A13Q7RTY0 426 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 C12orf40Q86WS4 652 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 KLHDC8BQ8IXV7 354 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 TMEM130Q8N3G9 435 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 NPWQ8N729 165 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 PNPLA1Q8N8W4 532 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 OR2T35Q8NGX2 323 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 MOSPD2Q8NHP6 518 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 SPATA22Q8NHS9 363 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 COQ8AQ8NI60 647 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 TMEM163Q8TC26 289 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 MRPS24Q96EL2 167 aaKnown RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 EPYCQ99645 322 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 PTDSS2Q9BVG9 487 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 FAM126AQ9BYI3 521 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 OR51M1Q9H341 326 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 TFB2MQ9H5Q4 396 aaKnown RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 EVA1AQ9H8M9 152 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 UCK1Q9HA47 277 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 NUDT15Q9NV35 164 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 ACAD8Q9UKU7 415 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 PCDHGA2Q9Y5H1 932 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 MYO18AQ92614 2054 aaKnown RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 SYNJ2BP-COX16A0A087WUM0 186 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 TRBV5-3A0A0A0MS03 114 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 TRBV23-1A0A0A0MS06 115 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 SMIM30A4D0T7 59 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 EFCAB7A8K855 629 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 D6RAR5 112 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 G3V3Q6 166 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 TEX46H3BTG2 121 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 M0R129 80 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 HAS3O00219 553 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 WRBO00258 174 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 CACNG3O60359 315 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 OR1I1O60431 355 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 MSCO60682 206 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 DPM1O60762 260 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 KERAO60938 352 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 ATG12O94817 140 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 KDM4BO94953 1096 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 CCNB2O95067 398 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 MT-CYBP00156 380 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 GLUD1P00367 558 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 IL6P05231 212 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 SULT1A3P0DMM9 295 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 SULT1A4P0DMN0 295 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 PIPP12273 146 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 CKMT1AP12532 417 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 ATF3P18847 181 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 UBA1P22314 1058 aaKnown RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 S100PP25815 95 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms