RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 XKR8Q9H6D3 395 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 WASF2Q9Y6W5 498 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 SLC16A8O95907 504 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 HTRA3P83110 453 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 GAS6Q14393 721 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 DUSP6Q16828 381 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 TMEM52BQ4KMG9 183 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 GPR153Q6NV75 609 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 HSD11B1LQ7Z5J1 315 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 C11orf16Q9NQ32 467 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 GALNT8Q9NY28 637 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 PTTG2Q9NZH5 202 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 ITGB1BP2Q9UKP3 347 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 BAIAP2Q9UQB8 552 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 FAM155AB1AL88 458 aaPredicted RBP11.47□□□□□ -0.57
PTPRF-205ENST00000414879 ITGA10O75578 1167 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 DHFRP00374 187 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 RHCEP18577 417 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 TAS2R38P59533 333 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 PITPNAQ00169 270 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 LCN8Q6JVE9 175 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 DPY19L2P1Q6NXN4 242 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 GAREM2Q75VX8 874 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 KBTBD2Q8IY47 623 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 ARMC5Q96C12 935 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 HIST1H2AAQ96QV6 131 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 MCHR1Q99705 422 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 ZNF717Q9BY31 904 aaPredicted RBP11.47□□□□□ -0.57
PTPRF-205ENST00000414879 R3HDMLQ9H3Y0 253 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 GSTO2Q9H4Y5 243 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 EBF2Q9HAK2 575 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 ELL3Q9HB65 397 aaPredicted RBP11.47□□□□□ -0.57
PTPRF-205ENST00000414879 FBRSL1Q9HCM7 1045 aaKnown RBP11.47□□□□□ -0.57
PTPRF-205ENST00000414879 PCDHGB2Q9Y5G2 931 aa11.47□□□□□ -0.57
PTPRF-205ENST00000414879 ARNTLO00327 626 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 ARL6IP5O75915 188 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 MT-ND1P03886 318 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 RORAP35398 523 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 SH3BP2P78314 561 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 PCDH1Q08174 1060 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 TDGQ13569 410 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 ATP1A4Q13733 1029 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 RABL3Q5HYI8 236 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 KLHL17Q6TDP4 642 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 KLHDC8AQ8IYD2 350 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 Q8N9G6 341 aaPredicted RBP11.46□□□□□ -0.57
PTPRF-205ENST00000414879 PHOSPHO1Q8TCT1 267 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 TANKQ92844 425 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 MND1Q9BWT6 205 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 COMMD9Q9P000 198 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 B4GALT7Q9UBV7 327 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 LOC100130705A0A1B0GUX0 176 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 HIDE1A8MVS5 230 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 AHRP35869 848 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 TUBA1BP68363 451 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 VEZF1Q14119 521 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 MAPK14Q16539 360 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 FLYWCH1Q4VC44 716 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 LRIF1Q5T3J3 769 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 TUBA1AQ71U36 451 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 ZSWIM9Q86XI8 627 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 RNASE11Q8TAA1 199 aaKnown RBP11.46□□□□□ -0.57
PTPRF-205ENST00000414879 UBTD2Q8WUN7 234 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 ASB11Q8WXH4 323 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 PIP5K1AQ99755 562 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 BOCQ9BWV1 1114 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 LGR4Q9BXB1 951 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 TNFRSF10DQ9UBN6 386 aa11.46□□□□□ -0.57
PTPRF-205ENST00000414879 EXOSC1Q9Y3B2 195 aaKnown RBP11.46□□□□□ -0.57
PTPRF-205ENST00000414879 WASHC1A8K0Z3 465 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 WASH3PC4AMC7 463 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 ZNF670-ZNF695F2Z2N8 137 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 GPR37L1O60883 481 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 RETP07949 1114 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 HMGA1P17096 107 aaKnown RBP11.46□□□□□ -0.58
PTPRF-205ENST00000414879 HK1P19367 917 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 ERVPABLB-1P60509 514 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 GRB7Q14451 532 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 UBAP2Q5T6F2 1119 aaKnown RBP11.46□□□□□ -0.58
PTPRF-205ENST00000414879 KIAA0895LQ68EN5 471 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 WASH2PQ6VEQ5 465 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 C6orf120Q7Z4R8 191 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 SYNPOQ8N3V7 929 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 ZSCAN1Q8NBB4 408 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 OR10H4Q8NGA5 316 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 OR2A12Q8NGT7 310 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 C16orf78Q8WTQ4 265 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 RBP7Q96R05 134 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 GPER1Q99527 375 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 DEFB126Q9BYW3 111 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 SLC35C2Q9NQQ7 365 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 ANKMY1Q9P2S6 941 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 EFCAB9A8MZ26 197 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 NPIPA5E9PKD4 350 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 AGRPO00253 132 aa11.46□□□□□ -0.58
PTPRF-205ENST00000414879 RNASET2O00584 256 aaKnown RBP11.46□□□□□ -0.58
PTPRF-205ENST00000414879 HTRA2O43464 458 aaPredicted RBP11.46□□□□□ -0.58
PTPRF-205ENST00000414879 KHDRBS3O75525 346 aaKnown RBP11.46□□□□□ -0.58
PTPRF-205ENST00000414879 EN2P19622 333 aaPredicted RBP11.46□□□□□ -0.58
PTPRF-205ENST00000414879 PGCP20142 388 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms