RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 MED8Q96G25 268 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 IL4I1Q96RQ9 567 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 MRPL9Q9BYD2 267 aaKnown RBP16.83■□□□□ 0.28
SDCBP-202ENST00000413219 POLR2J2Q9GZM3 115 aaKnown RBP16.83■□□□□ 0.28
SDCBP-202ENST00000413219 MYNNQ9NPC7 610 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 C11orf16Q9NQ32 467 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 RAB23Q9ULC3 237 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 TMCC3Q9ULS5 477 aa16.83■□□□□ 0.28
SDCBP-202ENST00000413219 FOXE1O00358 373 aaPredicted RBP16.82■□□□□ 0.28
SDCBP-202ENST00000413219 QSOX1O00391 747 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 MYL9P24844 172 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 HLA-DMAP28067 261 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 MAPK9P45984 424 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 ZNF91Q05481 1191 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 VEPH1Q14D04 833 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 MPP7Q5T2T1 576 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 MFSD4BQ5TF39 518 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 SLCO4C1Q6ZQN7 724 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 DDX53Q86TM3 631 aaKnown RBP16.82■□□□□ 0.28
SDCBP-202ENST00000413219 PHC2Q8IXK0 858 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 OR8J1Q8NGP2 316 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 APOBEC4Q8WW27 367 aaKnown RBP16.82■□□□□ 0.28
SDCBP-202ENST00000413219 CPEB1Q9BZB8 566 aaKnown RBP16.82■□□□□ 0.28
SDCBP-202ENST00000413219 MMP28Q9H239 520 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 ACSL6Q9UKU0 697 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 MAP4K5Q9Y4K4 846 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 YIPF1Q9Y548 306 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 A0A1W2PQ67 120 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 B4DXG7 233 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 ZNF197O14709 1029 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 NDUFB5O43674 189 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 SH3BGRLO75368 114 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 HBQ1P09105 142 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 CSF3P09919 207 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 SRCP12931 536 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 MPEG1Q2M385 716 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 FAM71E1Q6IPT2 247 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 CASP12Q6UXS9 341 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 DNAH12Q6ZR08 3092 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 UTS2BQ765I0 119 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 RAVER1Q8IY67 606 aaKnown RBP16.82■□□□□ 0.28
SDCBP-202ENST00000413219 CREB3L4Q8TEY5 395 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 FRMD6Q96NE9 622 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 MED18Q9BUE0 208 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 GON7Q9BXV9 100 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 MIXL1Q9H2W2 232 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 RNF121Q9H920 327 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 DNAJC27Q9NZQ0 273 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 BOLA1Q9Y3E2 137 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 SNX11Q9Y5W9 270 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 KCNE2Q9Y6J6 123 aa16.82■□□□□ 0.28
SDCBP-202ENST00000413219 TFECO14948 347 aaPredicted RBP16.81■□□□□ 0.28
SDCBP-202ENST00000413219 HOXA2O43364 376 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 TRIM3O75382 744 aaPredicted RBP16.81■□□□□ 0.28
SDCBP-202ENST00000413219 ABLIM3O94929 683 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 CDRT1O95170 752 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 EFEMP2O95967 443 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 CHRNB1P11230 501 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 IMPA1P29218 277 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 DSTNP60981 165 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 TAB1Q15750 504 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 PDZK1Q5T2W1 519 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 ZNF648Q5T619 568 aaPredicted RBP16.81■□□□□ 0.28
SDCBP-202ENST00000413219 REEP3Q6NUK4 255 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 COMMD6Q7Z4G1 85 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 TCTE3Q8IZS6 198 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 CACTIN-AS1Q8N1I8 211 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 ZNF461Q8TAF7 563 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 FIBINQ8TAL6 211 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 DHRS1Q96LJ7 313 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 SLC22A12Q96S37 553 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 C11orf54Q9H0W9 315 aaPredicted RBP16.81■□□□□ 0.28
SDCBP-202ENST00000413219 RANGRFQ9HD47 186 aaPredicted RBP16.81■□□□□ 0.28
SDCBP-202ENST00000413219 PRM3Q9NNZ6 103 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 ABCB9Q9NP78 766 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 PLSCR3Q9NRY6 295 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 ACOXLQ9NUZ1 547 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 B4GALT6Q9UBX8 382 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 LRFN2Q9ULH4 789 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 TRBV4-1A0A0J9YWV2 114 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 FABP12A6NFH5 140 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 CACNB4O00305 520 aaPredicted RBP16.81■□□□□ 0.28
SDCBP-202ENST00000413219 FAAHO00519 579 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 FFAR1O14842 300 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 MYL12BO14950 172 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 IRS1P35568 1242 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 WDR5P61964 334 aaKnown RBP16.81■□□□□ 0.28
SDCBP-202ENST00000413219 GALK2Q01415 458 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 C2orf80Q0P641 193 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 PUM1Q14671 1186 aaKnown RBP eCLIP16.81■□□□□ 0.28
SDCBP-202ENST00000413219 TIGD3Q6B0B8 471 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 OTOP2Q7RTS6 562 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 TMEM150AQ86TG1 271 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 NPAS4Q8IUM7 802 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 PEX5LQ8IYB4 626 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 CPXM2Q8N436 756 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 C16orf78Q8WTQ4 265 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 CIDECQ96AQ7 238 aaPredicted RBP16.81■□□□□ 0.28
SDCBP-202ENST00000413219 TIFAQ96CG3 184 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 WDR34Q96EX3 536 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms