RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 H3BMH7 237 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 PROM1O43490 865 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 B3GALT2O43825 422 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 RDH16O75452 317 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 MED26O95402 600 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 ANP32DO95626 131 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 C6orf47O95873 294 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 GSNP06396 782 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 GP1BAP07359 652 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 ZNF806P0C7X5 589 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 MSL3P1P0C860 447 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 HSD17B1P14061 328 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 ME2P23368 584 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 FRKP42685 505 aaPredicted RBP6.29□□□□□ -1.4
VPS41-204ENST00000413141 TRPC1P48995 793 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 ARL4DP49703 201 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 LIM2P55344 173 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 PCBP4P57723 403 aaKnown RBP6.29□□□□□ -1.4
VPS41-204ENST00000413141 OLR1P78380 273 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 RUNX2Q13950 521 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 KPNB1Q14974 876 aaKnown RBP6.29□□□□□ -1.4
VPS41-204ENST00000413141 SF3A2Q15428 464 aaKnown RBP6.29□□□□□ -1.4
VPS41-204ENST00000413141 GPR19Q15760 415 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 CLPPQ16740 277 aaPredicted RBP6.29□□□□□ -1.4
VPS41-204ENST00000413141 NDUFA9Q16795 377 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 SPATS1Q496A3 300 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 RUNDC3AQ59EK9 446 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 TCTE1Q5JU00 501 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 C6orf163Q5TEZ5 329 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 C1orf146Q5VVC0 180 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 GARNL3Q5VVW2 1013 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 C18orf63Q68DL7 685 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 SLC48A1Q6P1K1 146 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 ZNF574Q6ZN55 896 aaPredicted RBP6.29□□□□□ -1.4
VPS41-204ENST00000413141 PRR23CQ6ZRP0 262 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 GPR155Q7Z3F1 870 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 COL27A1Q8IZC6 1860 aaPredicted RBP6.29□□□□□ -1.4
VPS41-204ENST00000413141 CA13Q8N1Q1 262 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 NATD1Q8N6N6 113 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 TTC29Q8NA56 475 aaPredicted RBP6.29□□□□□ -1.4
VPS41-204ENST00000413141 FAM156AQ8NDB6 213 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 VPS37AQ8NEZ2 397 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 OR4A15Q8NGL6 344 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 OR9A4Q8NGU2 314 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 GOT1L1Q8NHS2 421 aaPredicted RBP6.29□□□□□ -1.4
VPS41-204ENST00000413141 WDR60Q8WVS4 1066 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 N4BP2L2Q92802 583 aaPredicted RBP6.29□□□□□ -1.4
VPS41-204ENST00000413141 EXOSC8Q96B26 276 aaKnown RBP6.29□□□□□ -1.4
VPS41-204ENST00000413141 ASB9Q96DX5 294 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 AURKBQ96GD4 344 aaPredicted RBP6.29□□□□□ -1.4
VPS41-204ENST00000413141 CNDP2Q96KP4 475 aaKnown RBP6.29□□□□□ -1.4
VPS41-204ENST00000413141 CCDC74BQ96LY2 380 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 GBP5Q96PP8 586 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 CSF3RQ99062 836 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 EDEM2Q9BV94 578 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 ALG2Q9H553 416 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 IKZF5Q9H5V7 419 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 ANKHQ9HCJ1 492 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 LYRM4Q9HD34 91 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 NEUROD4Q9HD90 331 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 SLAMF7Q9NQ25 335 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 PRDM9Q9NQV7 894 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 IRAK4Q9NWZ3 460 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 TAS2R7Q9NYW3 318 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 KCMF1Q9P0J7 381 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 PDP2Q9P2J9 529 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 GMPR2Q9P2T1 348 aaKnown RBP6.29□□□□□ -1.4
VPS41-204ENST00000413141 FTSJ1Q9UET6 329 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 CD300AQ9UGN4 299 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 UTS2RQ9UKP6 389 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 DAPP1Q9UN19 280 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 POMPQ9Y244 141 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 HCN4Q9Y3Q4 1203 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 L3MBTL1Q9Y468 752 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 VPS13AQ96RL7 3174 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 GPR179Q6PRD1 2367 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 A0A0A6YYC8 382 aaPredicted RBP6.28□□□□□ -1.4
VPS41-204ENST00000413141 IGHV5-10-1A0A0J9YXX1 117 aa6.28□□□□□ -1.4
VPS41-204ENST00000413141 A0A1W2PRB8 838 aa6.28□□□□□ -1.4
VPS41-204ENST00000413141 HYKKA2RU49 373 aa6.28□□□□□ -1.4
VPS41-204ENST00000413141 GLOD5A6NK44 160 aa6.28□□□□□ -1.4
VPS41-204ENST00000413141 A8MU76 341 aa6.28□□□□□ -1.4
VPS41-204ENST00000413141 I3L1I5 382 aaPredicted RBP6.28□□□□□ -1.4
VPS41-204ENST00000413141 SGK494L7N484 410 aa6.28□□□□□ -1.4
VPS41-204ENST00000413141 NTN3O00634 580 aaPredicted RBP6.28□□□□□ -1.4
VPS41-204ENST00000413141 CDX4O14627 284 aaPredicted RBP6.28□□□□□ -1.4
VPS41-204ENST00000413141 ACOT8O14734 319 aa6.28□□□□□ -1.4
VPS41-204ENST00000413141 NVLO15381 856 aaKnown RBP6.28□□□□□ -1.4
VPS41-204ENST00000413141 FOXS1O43638 330 aa6.28□□□□□ -1.4
VPS41-204ENST00000413141 MGRN1O60291 552 aa6.28□□□□□ -1.4
VPS41-204ENST00000413141 DNAJA2O60884 412 aa6.28□□□□□ -1.4
VPS41-204ENST00000413141 DNAJB6O75190 326 aa6.28□□□□□ -1.4
VPS41-204ENST00000413141 ENTPD5O75356 428 aa6.28□□□□□ -1.4
VPS41-204ENST00000413141 OR2B3O76000 313 aa6.28□□□□□ -1.4
VPS41-204ENST00000413141 NSA2O95478 260 aaKnown RBP6.28□□□□□ -1.4
VPS41-204ENST00000413141 CPSF4O95639 269 aaKnown RBP6.28□□□□□ -1.4
VPS41-204ENST00000413141 LDOC1O95751 146 aaPredicted RBP6.28□□□□□ -1.4
VPS41-204ENST00000413141 ABCB1P08183 1280 aaPredicted RBP6.28□□□□□ -1.4
VPS41-204ENST00000413141 ZCCHC18P0CG32 403 aa6.28□□□□□ -1.4
VPS41-204ENST00000413141 CD59P13987 128 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms