RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 HOXA6P31267 233 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 GRK3P35626 688 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 RPL3P39023 403 aaKnown RBP8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 SSR2P43308 183 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 ARFIP1P53367 373 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 IST1P53990 364 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 OLR1P78380 273 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 CFHR1Q03591 330 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 PPP1R8Q12972 351 aaKnown RBP8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 SLC9A5Q14940 896 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 ELOCQ15369 112 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 TMTC4Q5T4D3 741 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 C6orf52Q5T4I8 152 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 NKAIN2Q5VXU1 208 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 SLC36A4Q6YBV0 504 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 RNF130Q86XS8 419 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 DNAJC22Q8N4W6 341 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 HORMAD2Q8N7B1 307 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 ICA1LQ8NDH6 482 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 OR52N2Q8NGI0 321 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 SUN3Q8TAQ9 357 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 GATA6Q92908 595 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 FAM162AQ96A26 154 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 CENPNQ96H22 339 aaPredicted RBP8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 ZNF764Q96H86 408 aaPredicted RBP8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 PYURFQ96I23 114 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 ZNF681Q96N22 645 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 AMDHD1Q96NU7 426 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 BARD1Q99728 777 aaKnown RBP8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 ANKRA2Q9H9E1 313 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 SLC35C2Q9NQQ7 365 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 FSCN3Q9NQT6 498 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 ATAD3AQ9NVI7 634 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 VNN3Q9NY84 501 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 ANKMY1Q9P2S6 941 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 RAPGEFL1Q9UHV5 662 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 ZNF639Q9UID6 485 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 POMT2Q9UKY4 750 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 CNOT11Q9UKZ1 510 aaKnown RBP8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 MAP4K5Q9Y4K4 846 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 UNC80Q8N2C7 3258 aa8.17□□□□□ -1.1
HMGN1P34-201ENST00000413023 MYOCOSA0A1B0GUC4 107 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 LMO7DNF2Z398 122 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 BCAT2O15382 392 aaPredicted RBP8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 CLOCKO15516 846 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 PIAS2O75928 621 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 STAMBPO95630 424 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 RETP07949 1114 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 FUT4P22083 530 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 PSMA4P25789 261 aaKnown RBP8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 GSTM2P28161 218 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 PCGF2P35227 344 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 CRATP43155 626 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 CTSKP43235 329 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 FASLGP48023 281 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 MANFP55145 182 aaKnown RBP8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 RPS26P62854 115 aaKnown RBP8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 CHRNB3Q05901 458 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 LRRC74AQ0VAA2 488 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 HEPACAMQ14CZ8 416 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 NRF1Q16656 503 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 SAXO2Q658L1 398 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 SLC48A1Q6P1K1 146 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 CBLL1Q75N03 491 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 RNF44Q7L0R7 432 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 OLIG3Q7RTU3 272 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 KANSL1Q7Z3B3 1105 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 C6orf120Q7Z4R8 191 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 VTCN1Q7Z7D3 282 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 GKN2Q86XP6 184 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 MCATQ8IVS2 390 aaKnown RBP8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 OR4N5Q8IXE1 308 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 HS3ST5Q8IZT8 346 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 CBR4Q8N4T8 237 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 AVL9Q8NBF6 648 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 TMEM52Q8NDY8 209 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 SIMC1Q8NDZ2 872 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 TNIP2Q8NFZ5 429 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 PSMA8Q8TAA3 256 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 ZCCHC10Q8TBK6 192 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 DOK4Q8TEW6 326 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 RAB8BQ92930 207 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 TMBIM1Q969X1 311 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 THAP11Q96EK4 314 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 ZNF597Q96LX8 424 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 KCNC2Q96PR1 638 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 MAP3K3Q99759 626 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 EFHD1Q9BUP0 239 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 MIEF1Q9NQG6 463 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 ACSS1Q9NUB1 689 aaPredicted RBP8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 THEGQ9P2T0 379 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 ZNF282Q9UDV7 671 aaPredicted RBP8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 KCNE3Q9Y6H6 103 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 RNF215Q9Y6U7 377 aa8.16□□□□□ -1.1
HMGN1P34-201ENST00000413023 ZNF860A6NHJ4 632 aa8.15□□□□□ -1.1
HMGN1P34-201ENST00000413023 PDPK1O15530 556 aa8.15□□□□□ -1.1
HMGN1P34-201ENST00000413023 UBXN7O94888 489 aa8.15□□□□□ -1.1
HMGN1P34-201ENST00000413023 RECKO95980 971 aa8.15□□□□□ -1.1
HMGN1P34-201ENST00000413023 EIF2S1P05198 315 aaKnown RBP8.15□□□□□ -1.1
HMGN1P34-201ENST00000413023 TFPTP0C1Z6 253 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms