RNA–Protein interactions for RNA: ENST00000409767.5

PBRM1-207, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-207ENST00000409767 SIX1Q15475 284 aaPredicted RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 ZNF648Q5T619 568 aaPredicted RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 NANOGNBQ7Z5D8 188 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 MFSD2AQ8NA29 543 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 EVPLQ92817 2033 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 GAL3ST3Q96A11 431 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 ASB9Q96DX5 294 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 CPNE2Q96FN4 548 aaPredicted RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 HS6ST2Q96MM7 605 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 PKP4Q99569 1192 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 NAA11Q9BSU3 229 aaPredicted RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 MRPS26Q9BYN8 205 aaKnown RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 ANKMY1Q9P2S6 941 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 RAB26Q9ULW5 256 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 TRBC2A0A5B9 178 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 GJE1A6NN92 205 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 NPIPA5E9PKD4 350 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 PGRMC2O15173 223 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 PCDHGA12O60330 932 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 HCN1O60741 890 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 FARS2O95363 451 aaKnown RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 PDGFBP01127 241 aaPredicted RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 MTPNP58546 118 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 LASP1Q14847 261 aaKnown RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 MYBPC3Q14896 1274 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 CSRP2Q16527 193 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 TRIM16LQ309B1 348 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 UNC50Q53HI1 259 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 COQ5Q5HYK3 327 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 RPL13AP3Q6NVV1 102 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 KLHDC8AQ8IYD2 350 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 METTL25Q8N6Q8 603 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 PACRGLQ8N7B6 248 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 MDGA1Q8NFP4 955 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 CHID1Q9BWS9 393 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 C1orf21Q9H246 121 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 PLEKHA1Q9HB21 404 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 ZBTB26Q9HCK0 441 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 ACSS2Q9NR19 701 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 NXT1Q9UKK6 140 aaKnown RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 PACSIN3Q9UKS6 424 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 NPIPA1Q9UND3 350 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 RPL36Q9Y3U8 105 aaKnown RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 PRAMEF2O60811 474 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 C6orf47O95873 294 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 BCHEP06276 602 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 ZNF3P17036 446 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 IL4RP24394 825 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 CCR2P41597 374 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 PTDSS1P48651 473 aaKnown RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 RPL34P49207 117 aaKnown RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 CLDN8P56748 225 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 PPP3R1P63098 170 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 CTBSQ01459 385 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 TARDBPQ13148 414 aaKnown RBP eCLIP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 TRAM2Q15035 370 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 LRIF1Q5T3J3 769 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 PPP1R3BQ86XI6 285 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 CLVS1Q8IUQ0 354 aaPredicted RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 ZCCHC7Q8N3Z6 543 aaKnown RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 SLC5A8Q8N695 610 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 FITM2Q8N6M3 262 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 RASGEF1AQ8N9B8 481 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 OR7A2PQ8NGA2 310 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 OR4C15Q8NGM1 316 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 RNASE11Q8TAA1 199 aaKnown RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 TCTN2Q96GX1 697 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 SLC22A12Q96S37 553 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 SMAD5Q99717 465 aaKnown RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 MAPKAP1Q9BPZ7 522 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 PPP4R1LQ9P1A2 415 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 LRIT1Q9P2V4 623 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 POFUT2Q9Y2G5 429 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 TESMINQ9Y4I5 508 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 MYO5AQ9Y4I1 1855 aaKnown RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 METTL12A8MUP2 240 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 M0QX08 132 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 RGS10O43665 173 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 ZBTB11O95625 1053 aaPredicted RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 ALDOAP04075 364 aaKnown RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 PABPC4LP0CB38 370 aaKnown RBP6.06□□□□□ -1.44
PBRM1-207ENST00000409767 AHRP35869 848 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 EMP2P54851 167 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 INHBCP55103 352 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 RAPSNQ13702 412 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 MFSD13AQ14CX5 517 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 PDK3Q15120 406 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 TYSND1Q2T9J0 566 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 DEFB133Q30KQ1 61 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 FLYWCH1Q4VC44 716 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 CRB2Q5IJ48 1285 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 PRSS36Q5K4E3 855 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 SPANXN4Q5MJ08 99 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 PAMR1Q6UXH9 720 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 SLC34A3Q8N130 599 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 OR8H2Q8N162 312 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 NUP43Q8NFH3 380 aa6.06□□□□□ -1.44
PBRM1-207ENST00000409767 FCGR1BQ92637 280 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms