RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 C16orf52Q8NHV5 167 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 UBTD2Q8WUN7 234 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 F2RL3Q96RI0 385 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 VKORC1Q9BQB6 163 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 MS4A8Q9BY19 250 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 PRDM7Q9NQW5 492 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 HPF1Q9NWY4 346 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 VTI1BQ9UEU0 232 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 ADGRE2Q9UHX3 823 aa13.73□□□□□ -0.21
CBX3-203ENST00000409747 NCOA6Q14686 2063 aaPredicted RBP13.72□□□□□ -0.21
CBX3-203ENST00000409747 CCDC189A1A4V9 331 aa13.72□□□□□ -0.21
CBX3-203ENST00000409747 SYCE1LA8MT33 242 aa13.72□□□□□ -0.21
CBX3-203ENST00000409747 K7EPI3 171 aa13.72□□□□□ -0.21
CBX3-203ENST00000409747 LTA4HP09960 611 aaKnown RBP13.72□□□□□ -0.21
CBX3-203ENST00000409747 SLC35E2BP0CK96 405 aa13.72□□□□□ -0.21
CBX3-203ENST00000409747 EPORP19235 508 aa13.72□□□□□ -0.21
CBX3-203ENST00000409747 HSF1Q00613 529 aa13.72□□□□□ -0.21
CBX3-203ENST00000409747 ISCA2Q86U28 154 aa13.72□□□□□ -0.21
CBX3-203ENST00000409747 LAS2Q8IYD9 372 aa13.72□□□□□ -0.21
CBX3-203ENST00000409747 ZFP62Q8NB50 900 aaPredicted RBP13.72□□□□□ -0.21
CBX3-203ENST00000409747 FBXO25Q8TCJ0 367 aa13.72□□□□□ -0.21
CBX3-203ENST00000409747 ASB15Q8WXK1 588 aa13.72□□□□□ -0.21
CBX3-203ENST00000409747 CENPKQ9BS16 269 aa13.72□□□□□ -0.21
CBX3-203ENST00000409747 MYOTQ9UBF9 498 aa13.72□□□□□ -0.21
CBX3-203ENST00000409747 OR2J2O76002 312 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 SCELO95171 688 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 PCNAP12004 261 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 EPB42P16452 691 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 HIST1H1TP22492 207 aaPredicted RBP13.71□□□□□ -0.21
CBX3-203ENST00000409747 ATP5A1P25705 553 aaKnown RBP13.71□□□□□ -0.21
CBX3-203ENST00000409747 PTGER1P34995 402 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 PTGS2P35354 604 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 SSR2P43308 183 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 PCDH1Q08174 1060 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 AP5B1Q2VPB7 878 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 CMC1Q7Z7K0 106 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 DOLPP1Q86YN1 238 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 ACOT4Q8N9L9 421 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 PSD4Q8NDX1 1056 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 OR8K3Q8NH51 312 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 FBF1Q8TES7 1133 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 ZNF473Q8WTR7 871 aaKnown RBP13.71□□□□□ -0.21
CBX3-203ENST00000409747 MTFMTQ96DP5 389 aaKnown RBP13.71□□□□□ -0.21
CBX3-203ENST00000409747 CMTM7Q96FZ5 175 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 PHF12Q96QT6 1004 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 ATOH8Q96SQ7 321 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 ALOXE3Q9BYJ1 711 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 KCMF1Q9P0J7 381 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 COPS7AQ9UBW8 275 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 ACOT9Q9Y305 439 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 ASB1Q9Y576 335 aa13.71□□□□□ -0.21
CBX3-203ENST00000409747 CSMD1Q96PZ7 3565 aa13.71□□□□□ -0.22
CBX3-203ENST00000409747 A0A087X1B8 175 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 ACOT7O00154 380 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 DYRK3O43781 588 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 COX7A2P14406 83 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 TNNI3P19429 210 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 FAM83EQ2M2I3 478 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 GRHL2Q6ISB3 625 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 ARHGAP11AQ6P4F7 1023 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 PAOXQ6QHF9 649 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 ZNF793Q6ZN11 406 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 MDGA2Q7Z553 956 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 CHERPQ8IWX8 916 aaKnown RBP13.7□□□□□ -0.22
CBX3-203ENST00000409747 OR5L2Q8NGL0 311 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 RHEBL1Q8TAI7 183 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 FAM57AQ8TBR7 257 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 PTPMT1Q8WUK0 201 aaPredicted RBP13.7□□□□□ -0.22
CBX3-203ENST00000409747 OR8D2Q9GZM6 311 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 MS4A12Q9NXJ0 267 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 COQ3Q9NZJ6 369 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 PPT2Q9UMR5 302 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 ANGPTL3Q9Y5C1 460 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 A0A1B0GTH9 108 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 C17orf105B2RV13 164 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 UBXN8O00124 270 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 HS6ST1O60243 411 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 PRKNO60260 465 aaPredicted RBP13.7□□□□□ -0.22
CBX3-203ENST00000409747 CDC40O60508 579 aaKnown RBP eCLIP13.7□□□□□ -0.22
CBX3-203ENST00000409747 FAM155BO75949 473 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 TPOP07202 933 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 CPN2P22792 545 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 RFC3P40938 356 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 GPR85P60893 370 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 ETF1P62495 437 aaKnown RBP13.7□□□□□ -0.22
CBX3-203ENST00000409747 PHEXP78562 749 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 BIKQ13323 160 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 KHDRBS2Q5VWX1 349 aaKnown RBP13.7□□□□□ -0.22
CBX3-203ENST00000409747 RGS9BPQ6ZS82 235 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 UBE3DQ7Z6J8 389 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 OR7G3Q8NG95 312 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 RASL10BQ96S79 203 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 DMRTA2Q96SC8 542 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 MAPKAP1Q9BPZ7 522 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 IGSF5Q9NSI5 407 aa13.7□□□□□ -0.22
CBX3-203ENST00000409747 TMEM200CA6NKL6 621 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 LDB3O75112 727 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 TGFB1P01137 390 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 PIK3CBP42338 1070 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 RAP1GDS1P52306 607 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms