RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ID1P41134 155 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 ADARP55265 1226 aaKnown RBP3.11□□□□□ -1.91
PMS1-203ENST00000409593 AKAP17AQ02040 695 aaKnown RBP3.11□□□□□ -1.91
PMS1-203ENST00000409593 ATAD3CQ5T2N8 411 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 ZNF730Q6ZMV8 503 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 SIX6OS1Q8N1H7 587 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 C8orf46Q8TAG6 207 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 SAP25Q8TEE9 199 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 UBLCP1Q8WVY7 318 aaPredicted RBP3.11□□□□□ -1.91
PMS1-203ENST00000409593 CORO2AQ92828 525 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 C17orf62Q9BQA9 187 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 CCM2Q9BSQ5 444 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 THUMPD3Q9BV44 507 aaKnown RBP3.11□□□□□ -1.91
PMS1-203ENST00000409593 IDI2Q9BXS1 227 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 CUEDC2Q9H467 287 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 ZNF665Q9H7R5 613 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 VIPAS39Q9H9C1 493 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 TNFRSF19Q9NS68 423 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 CUTCQ9NTM9 273 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 ZNF319Q9P2F9 582 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 SPATA2Q9UM82 520 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 GPR132Q9UNW8 380 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 MRPL11Q9Y3B7 192 aaKnown RBP3.11□□□□□ -1.91
PMS1-203ENST00000409593 NAALAD2Q9Y3Q0 740 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 BCLAF3A2AJT9 711 aaKnown RBP3.11□□□□□ -1.91
PMS1-203ENST00000409593 OR5H15A6NDH6 313 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 ZNF646O15015 1829 aaPredicted RBP3.11□□□□□ -1.91
PMS1-203ENST00000409593 IER3P46695 156 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 KRTAP12-2P59991 146 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 Q1RN00 199 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 MPP7Q5T2T1 576 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 ALKBH5Q6P6C2 394 aaKnown RBP3.11□□□□□ -1.91
PMS1-203ENST00000409593 DCLRE1AQ6PJP8 1040 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 NME8Q8N427 588 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 DEPDC1BQ8WUY9 529 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 FAM162AQ96A26 154 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 CNOT6LQ96LI5 555 aaKnown RBP3.11□□□□□ -1.91
PMS1-203ENST00000409593 CITED2Q99967 270 aaPredicted RBP3.11□□□□□ -1.91
PMS1-203ENST00000409593 GPR173Q9NS66 373 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 FBXO7Q9Y3I1 522 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 NEDD8-MDP1E9PL57 170 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 IFIT3O14879 490 aaKnown RBP3.1□□□□□ -1.91
PMS1-203ENST00000409593 OR9G9P0C7N8 305 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 DUX4L4P0CJ87 422 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 PPP2R1AP30153 589 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 RPL34P49207 117 aaKnown RBP3.1□□□□□ -1.91
PMS1-203ENST00000409593 SLC3A1Q07837 685 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 IQCCQ4KMZ1 466 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 SLC22A6Q4U2R8 563 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 ARMCX5Q6P1M9 558 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 SIGLEC15Q6ZMC9 328 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 VSIG1Q86XK7 387 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 ZNF781Q8N8C0 355 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 NHLRC2Q8NBF2 726 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 CLEC1AQ8NC01 280 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 OR6T1Q8NGN1 323 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 HSD17B14Q9BPX1 270 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 SLCO1C1Q9NYB5 712 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 B4GALT7Q9UBV7 327 aa3.1□□□□□ -1.91
PMS1-203ENST00000409593 M0R296 226 aa3.09□□□□□ -1.91
PMS1-203ENST00000409593 LRRTM2O43300 516 aa3.09□□□□□ -1.91
PMS1-203ENST00000409593 SLU7O95391 586 aaKnown RBP3.09□□□□□ -1.91
PMS1-203ENST00000409593 SKILP12757 684 aa3.09□□□□□ -1.91
PMS1-203ENST00000409593 CRMP1Q14194 572 aa3.09□□□□□ -1.91
PMS1-203ENST00000409593 ACKR1Q16570 336 aa3.09□□□□□ -1.91
PMS1-203ENST00000409593 VWA2Q5GFL6 755 aa3.09□□□□□ -1.91
PMS1-203ENST00000409593 PODNL1Q6PEZ8 512 aa3.09□□□□□ -1.91
PMS1-203ENST00000409593 CACUL1Q86Y37 369 aa3.09□□□□□ -1.91
PMS1-203ENST00000409593 ZNF444Q8N0Y2 327 aaPredicted RBP3.09□□□□□ -1.91
PMS1-203ENST00000409593 AFAP1L1Q8TED9 768 aa3.09□□□□□ -1.91
PMS1-203ENST00000409593 MR1Q95460 341 aa3.09□□□□□ -1.91
PMS1-203ENST00000409593 CCDC114Q96M63 670 aa3.09□□□□□ -1.91
PMS1-203ENST00000409593 MRPL17Q9NRX2 175 aaKnown RBP3.09□□□□□ -1.91
PMS1-203ENST00000409593 ARMCX1Q9P291 453 aa3.09□□□□□ -1.91
PMS1-203ENST00000409593 ARMCX3Q9UH62 379 aaPredicted RBP3.09□□□□□ -1.91
PMS1-203ENST00000409593 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.92
PMS1-203ENST00000409593 ZNF724A8MTY0 619 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 SLC30A4O14863 429 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 ZNF253O75346 499 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 SCG2P13521 617 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 FHITP49789 147 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 CCL14Q16627 93 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 FHL5Q5TD97 284 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 REP15Q6BDI9 236 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 AQP12AQ8IXF9 295 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 CCDC197Q8NCU1 140 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 ZNRF1Q8ND25 227 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 ERGIC2Q96RQ1 377 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 RASL10BQ96S79 203 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 PARK7Q99497 189 aaKnown RBP3.08□□□□□ -1.92
PMS1-203ENST00000409593 DHRS4-AS1Q9P1J3 65 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 KIAA1217Q5T5P2 1943 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 TRAV9-2A0A087WT02 112 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 A0A1W2PQ72 361 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 SRRM4A7MD48 611 aaKnown RBP3.08□□□□□ -1.92
PMS1-203ENST00000409593 FOXI3A8MTJ6 420 aaPredicted RBP3.08□□□□□ -1.92
PMS1-203ENST00000409593 FRAT2O75474 233 aaPredicted RBP3.08□□□□□ -1.92
PMS1-203ENST00000409593 RAD51DO75771 328 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 KBTBD11O94819 623 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 CASTP20810 708 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms